Difference between revisions of "TSS:Hg 237077.1"
From referenceTSS
| Line 6: | Line 6: | ||
|HEL-176= | |HEL-176= | ||
|all_trans=ENST00000472042.1:128 AK026766:128 ENST00000551333.1:-134 | |all_trans=ENST00000472042.1:128 AK026766:128 ENST00000551333.1:-134 | ||
| − | |chr= | + | |chr=chr18 |
|cpg_percent=0.05 | |cpg_percent=0.05 | ||
|distance=128 | |distance=128 | ||
|distance_to_tss=1975 | |distance_to_tss=1975 | ||
| − | |end= | + | |end=3455286 |
|end_of_center_position=3455286 | |end_of_center_position=3455286 | ||
|entrez_id=71 | |entrez_id=71 | ||
| Line 29: | Line 29: | ||
|num_trans=3 | |num_trans=3 | ||
|species=human | |species=human | ||
| − | |start= | + | |start=3455285 |
|start_of_center_position=3455285 | |start_of_center_position=3455285 | ||
|strand=+ | |strand=+ | ||
|transcript_name=ENST00000472042.1 AK026766 | |transcript_name=ENST00000472042.1 AK026766 | ||
| − | |tss_classification= | + | |tss_classification=no |
|tss_id=hg_237077.1 | |tss_id=hg_237077.1 | ||
|tss_score=1 | |tss_score=1 | ||
|uniprot_id=Q15583 | |uniprot_id=Q15583 | ||
}} | }} | ||
Revision as of 10:24, 14 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 3455285 |
|---|---|
| End of the center position in the TSS region: | 3455286 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000472042.1 AK026766 |
|---|---|
| Distance: | 128 |
| Num_trans: | 3 |
| All_trans: | ENST00000472042.1:128 AK026766:128 ENST00000551333.1:-134 |
TATA-Box annotation
| Distance to TSS: | 1975 |
|---|---|
| Nearest PromoterID: | NM_001199954 |
| Entrez ID: | 71 |
| Nearest Unigene: | Hs.514581 |
| Nearest Refseq: | NM_001614 |
| Nearest Ensembl: | ENSG00000184009 |
| Gene Name: | TGFB induced factor homeobox 1 |
| Gene Alias: | ACT|ACTG|DFNA20|DFNA26|HEL-176 |
| Gene Description: | actin gamma 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.05 |
| GC%: | 0.621891 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
