Difference between revisions of "TSS:Hg 237332.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
|all_trans=ENST00000595684.5:-11 ENST00000332386.9:-11 ENST00000335393.8:-11 NM_001098524:-11 NM_173544:-11 AY254197:-11 AY254198:-11 AY254199:-11 BC167806:127 | |all_trans=ENST00000595684.5:-11 ENST00000332386.9:-11 ENST00000335393.8:-11 NM_001098524:-11 NM_173544:-11 AY254197:-11 AY254198:-11 AY254199:-11 BC167806:127 | ||
| − | |chr= | + | |chr=chr19 |
|cpg_percent=0.025 | |cpg_percent=0.025 | ||
|distance=-11 | |distance=-11 | ||
|distance_to_tss=-188676 | |distance_to_tss=-188676 | ||
| − | |end= | + | |end=17523312 |
|end_of_center_position=17523312 | |end_of_center_position=17523312 | ||
|entrez_id=4729 | |entrez_id=4729 | ||
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|num_trans=9 | |num_trans=9 | ||
|species=human | |species=human | ||
| − | |start= | + | |start=17523311 |
|start_of_center_position=17523311 | |start_of_center_position=17523311 | ||
| − | |strand= | + | |strand=+ |
|tata_box=42(TCCCTTTTAAGG,-,0.00),43(CCCTTTTAAGGG,-,0.00),44(CCTTTTAAGGGC,+,0.00) | |tata_box=42(TCCCTTTTAAGG,-,0.00),43(CCCTTTTAAGGG,-,0.00),44(CCTTTTAAGGGC,+,0.00) | ||
|transcript_name=ENST00000595684.5 ENST00000332386.9 ENST00000335393.8 NM_001098524 NM_173544 AY254197 AY254198 AY254199 | |transcript_name=ENST00000595684.5 ENST00000332386.9 ENST00000335393.8 NM_001098524 NM_173544 AY254197 AY254198 AY254199 | ||
Revision as of 10:30, 14 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 17523311 |
|---|---|
| End of the center position in the TSS region: | 17523312 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000595684.5 ENST00000332386.9 ENST00000335393.8 NM_001098524 NM_173544 AY254197 AY254198 AY254199 |
|---|---|
| Distance: | -11 |
| Num_trans: | 9 |
| All_trans: | ENST00000595684.5:-11 ENST00000332386.9:-11 ENST00000335393.8:-11 NM_001098524:-11 NM_173544:-11 AY254197:-11 AY254198:-11 AY254199:-11 BC167806:127 |
TATA-Box annotation
| Distance to TSS: | -188676 |
|---|---|
| Nearest PromoterID: | NM_021074 |
| Entrez ID: | 4729 |
| Nearest Unigene: | Hs.464572 |
| Nearest Refseq: | NM_021074 |
| Nearest Ensembl: | ENSG00000178127 |
| Gene Name: | niban apoptosis regulator 3 |
| Gene Alias: | CI-24k|MC1DN7 |
| Gene Description: | NADH:ubiquinone oxidoreductase core subunit V2 |
| Gene Type: | protein-coding |
| CpG%: | 0.025 |
| GC%: | 0.497512 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | 42(TCCCTTTTAAGG,-,0.00),43(CCCTTTTAAGGG,-,0.00),44(CCTTTTAAGGGC,+,0.00) |
