Difference between revisions of "TSS:Hg 242759.1"
From referenceTSS
| Line 4: | Line 4: | ||
|ZNF325= | |ZNF325= | ||
|all_trans=AK291620:0 BC142953:-11 ENST00000518913.5:-35 BC002593:-35 BC009305:-35 BC032105:-35 BC044626:-35 ENST00000520982.5:37 ENST00000520626.6:37 BC136679:37 BC144365:37 BC144366:37 ENST00000518656.5:48 BC101763:48 BC101765:48 BC143338:48 ENST00000306349.13:85 ENST00000306385.10:85 NM_001199:85 NR_033403:85 NM_006129:85 NR_033404:85 M22488:90 ENST00000520970.5:-100 AB209590:-100 ENST00000471755.5:113 ENST00000483364.5:113 ENST00000521385.5:113 Y08723:113 Y08724:113 Y08725:113 AB527418:118 KJ896503:118 U50330:119 ENST00000397814.7:-147 ENST00000354870.5:-147 | |all_trans=AK291620:0 BC142953:-11 ENST00000518913.5:-35 BC002593:-35 BC009305:-35 BC032105:-35 BC044626:-35 ENST00000520982.5:37 ENST00000520626.6:37 BC136679:37 BC144365:37 BC144366:37 ENST00000518656.5:48 BC101763:48 BC101765:48 BC143338:48 ENST00000306349.13:85 ENST00000306385.10:85 NM_001199:85 NR_033403:85 NM_006129:85 NR_033404:85 M22488:90 ENST00000520970.5:-100 AB209590:-100 ENST00000471755.5:113 ENST00000483364.5:113 ENST00000521385.5:113 Y08723:113 Y08724:113 Y08725:113 AB527418:118 KJ896503:118 U50330:119 ENST00000397814.7:-147 ENST00000354870.5:-147 | ||
| − | |chr= | + | |chr=chr8 |
|cpg_percent=0.02 | |cpg_percent=0.02 | ||
|distance=0 | |distance=0 | ||
|distance_to_tss=15298 | |distance_to_tss=15298 | ||
| − | |end= | + | |end=22165287 |
|end_of_center_position=22165287 | |end_of_center_position=22165287 | ||
|entrez_id=7559 | |entrez_id=7559 | ||
| Line 27: | Line 27: | ||
|num_trans=36 | |num_trans=36 | ||
|species=human | |species=human | ||
| − | |start= | + | |start=22165286 |
|start_of_center_position=22165286 | |start_of_center_position=22165286 | ||
|strand=+ | |strand=+ | ||
|transcript_name=AK291620 | |transcript_name=AK291620 | ||
| − | |tss_classification= | + | |tss_classification=yes |
|tss_id=hg_242759.1 | |tss_id=hg_242759.1 | ||
|tss_score=1 | |tss_score=1 | ||
|uniprot_id= | |uniprot_id= | ||
}} | }} | ||
Revision as of 12:35, 14 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 22165286 |
|---|---|
| End of the center position in the TSS region: | 22165287 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | AK291620 |
|---|---|
| Distance: | 0 |
| Num_trans: | 36 |
| All_trans: | AK291620:0 BC142953:-11 ENST00000518913.5:-35 BC002593:-35 BC009305:-35 BC032105:-35 BC044626:-35 ENST00000520982.5:37 ENST00000520626.6:37 BC136679:37 BC144365:37 BC144366:37 ENST00000518656.5:48 BC101763:48 BC101765:48 BC143338:48 ENST00000306349.13:85 ENST00000306385.10:85 NM_001199:85 NR_033403:85 NM_006129:85 NR_033404:85 M22488:90 ENST00000520970.5:-100 AB209590:-100 ENST00000471755.5:113 ENST00000483364.5:113 ENST00000521385.5:113 Y08723:113 Y08724:113 Y08725:113 AB527418:118 KJ896503:118 U50330:119 ENST00000397814.7:-147 ENST00000354870.5:-147 |
TATA-Box annotation
| Distance to TSS: | 15298 |
|---|---|
| Nearest PromoterID: | NM_006956 |
| Entrez ID: | 7559 |
| Nearest Unigene: | Hs.431471 |
| Nearest Refseq: | NM_006956 |
| Nearest Ensembl: | ENSG00000164631 |
| Gene Name: | bone morphogenetic protein 1 |
| Gene Alias: | GIOT-3|HZF11|KOX3|ZNF325 |
| Gene Description: | zinc finger protein 12 |
| Gene Type: | protein-coding |
| CpG%: | 0.02 |
| GC%: | 0.437811 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
