Difference between revisions of "TSS:Hg 242827.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
|all_trans=ENST00000265707.10:35 NM_001190956:35 NM_001320313:35 NM_014237:35 NR_135201:35 ENST00000520001.5:-44 AK313961:45 ENST00000379866.5:48 AY358321:48 ENST00000520772.5:52 BC070279:52 BC034624:55 KJ892612:86 KJ892613:88 CU687082:89 ENST00000520087.5:90 AJ133004:90 BC121045:90 BC121046:90 AK225744:98 | |all_trans=ENST00000265707.10:35 NM_001190956:35 NM_001320313:35 NM_014237:35 NR_135201:35 ENST00000520001.5:-44 AK313961:45 ENST00000379866.5:48 AY358321:48 ENST00000520772.5:52 BC070279:52 BC034624:55 KJ892612:86 KJ892613:88 CU687082:89 ENST00000520087.5:90 AJ133004:90 BC121045:90 BC121046:90 AK225744:98 | ||
| − | |chr= | + | |chr=chr8 |
|cpg_percent=0.08 | |cpg_percent=0.08 | ||
|distance=35 | |distance=35 | ||
|distance_to_tss=-40756 | |distance_to_tss=-40756 | ||
| − | |end= | + | |end=39584533 |
|end_of_center_position=39584533 | |end_of_center_position=39584533 | ||
|entrez_id=5575 | |entrez_id=5575 | ||
| Line 24: | Line 24: | ||
|num_trans=20 | |num_trans=20 | ||
|species=human | |species=human | ||
| − | |start= | + | |start=39584532 |
|start_of_center_position=39584532 | |start_of_center_position=39584532 | ||
|strand=+ | |strand=+ | ||
Revision as of 12:36, 14 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 39584532 |
|---|---|
| End of the center position in the TSS region: | 39584533 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000265707.10 NM_001190956 NM_001320313 NM_014237 NR_135201 |
|---|---|
| Distance: | 35 |
| Num_trans: | 20 |
| All_trans: | ENST00000265707.10:35 NM_001190956:35 NM_001320313:35 NM_014237:35 NR_135201:35 ENST00000520001.5:-44 AK313961:45 ENST00000379866.5:48 AY358321:48 ENST00000520772.5:52 BC070279:52 BC034624:55 KJ892612:86 KJ892613:88 CU687082:89 ENST00000520087.5:90 AJ133004:90 BC121045:90 BC121046:90 AK225744:98 |
TATA-Box annotation
| Distance to TSS: | -40756 |
|---|---|
| Nearest PromoterID: | NM_001164758 |
| Entrez ID: | 5575 |
| Nearest Unigene: | Hs.520851 |
| Nearest Refseq: | NM_002735 |
| Nearest Ensembl: | ENSG00000188191 |
| Gene Name: | ADAM metallopeptidase domain 18 |
| Gene Alias: | PRKAR1 |
| Gene Description: | protein kinase cAMP-dependent type I regulatory subunit beta |
| Gene Type: | protein-coding |
| CpG%: | 0.08 |
| GC%: | 0.671642 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
