Difference between revisions of "TSS:Hg 242844.1"
From referenceTSS
| Line 6: | Line 6: | ||
|P450L1= | |P450L1= | ||
|all_trans=ENST00000338368.7:-18 U34994:-18 U47077:-23 ENST00000314191.7:24 NM_001081640:24 NM_006904:24 AK296833:24 | |all_trans=ENST00000338368.7:-18 U34994:-18 U47077:-23 ENST00000314191.7:24 NM_001081640:24 NM_006904:24 AK296833:24 | ||
| − | |chr= | + | |chr=chr8 |
|cpg_percent=0.005 | |cpg_percent=0.005 | ||
|distance=-18 | |distance=-18 | ||
|distance_to_tss=64390 | |distance_to_tss=64390 | ||
| − | |end= | + | |end=47960160 |
|end_of_center_position=47960160 | |end_of_center_position=47960160 | ||
|entrez_id=1595 | |entrez_id=1595 | ||
| Line 29: | Line 29: | ||
|num_trans=7 | |num_trans=7 | ||
|species=human | |species=human | ||
| − | |start= | + | |start=47960159 |
|start_of_center_position=47960159 | |start_of_center_position=47960159 | ||
| − | |strand= | + | |strand=- |
|tata_box=0(CTCTCTAAAGAG,-,0.00) | |tata_box=0(CTCTCTAAAGAG,-,0.00) | ||
|transcript_name=ENST00000338368.7 U34994 | |transcript_name=ENST00000338368.7 U34994 | ||
| − | |tss_classification= | + | |tss_classification=yes |
|tss_id=hg_242844.1 | |tss_id=hg_242844.1 | ||
|tss_score=1 | |tss_score=1 | ||
|uniprot_id=P78527 | |uniprot_id=P78527 | ||
}} | }} | ||
Revision as of 12:37, 14 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 47960159 |
|---|---|
| End of the center position in the TSS region: | 47960160 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000338368.7 U34994 |
|---|---|
| Distance: | -18 |
| Num_trans: | 7 |
| All_trans: | ENST00000338368.7:-18 U34994:-18 U47077:-23 ENST00000314191.7:24 NM_001081640:24 NM_006904:24 AK296833:24 |
TATA-Box annotation
| Distance to TSS: | 64390 |
|---|---|
| Nearest PromoterID: | NM_000786 |
| Entrez ID: | 1595 |
| Nearest Unigene: | Hs.417077 |
| Nearest Refseq: | NM_000786 |
| Nearest Ensembl: | ENSG00000001630 |
| Gene Name: | protein kinase, DNA-activated, catalytic subunit |
| Gene Alias: | CP51|CYP51|CYPL1|LDM|P450-14DM|P450L1 |
| Gene Description: | cytochrome P450 family 51 subfamily A member 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.005 |
| GC%: | 0.348259 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | 0(CTCTCTAAAGAG,-,0.00) |
