Difference between revisions of "TSS:Hg 243130.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
|all_trans=NM_001257975:-38 AK296363:-38 ENST00000538431.5:127 ENST00000324544.6:289 ENST00000357558.9:477 AK292713:486 AK316393:486 ENST00000372938.10:494 ENST00000629610.2:494 NM_001131018:494 NM_001131017:494 NM_001257976:494 NM_001131016:494 AK303288:494 AK303636:494 AK027287:494 ENST00000372954.5:498 BC021163:498 | |all_trans=NM_001257975:-38 AK296363:-38 ENST00000538431.5:127 ENST00000324544.6:289 ENST00000357558.9:477 AK292713:486 AK316393:486 ENST00000372938.10:494 ENST00000629610.2:494 NM_001131018:494 NM_001131017:494 NM_001257976:494 NM_001131016:494 AK303288:494 AK303636:494 AK027287:494 ENST00000372954.5:498 BC021163:498 | ||
| − | |chr= | + | |chr=chr9 |
|cpg_percent=0.005 | |cpg_percent=0.005 | ||
|distance=-38 | |distance=-38 | ||
|distance_to_tss=5106 | |distance_to_tss=5106 | ||
| − | |end= | + | |end=128192066 |
|end_of_center_position=128192066 | |end_of_center_position=128192066 | ||
|entrez_id=100507341 | |entrez_id=100507341 | ||
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|num_trans=18 | |num_trans=18 | ||
|species=human | |species=human | ||
| − | |start= | + | |start=128192065 |
|start_of_center_position=128192065 | |start_of_center_position=128192065 | ||
| − | |strand= | + | |strand=- |
|transcript_name=NM_001257975 AK296363 | |transcript_name=NM_001257975 AK296363 | ||
| − | |tss_classification= | + | |tss_classification=yes |
|tss_id=hg_243130.1 | |tss_id=hg_243130.1 | ||
|tss_score=1 | |tss_score=1 | ||
|uniprot_id=B7Z3U7 Q9ULV3 | |uniprot_id=B7Z3U7 Q9ULV3 | ||
}} | }} | ||
Revision as of 12:43, 14 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 128192065 |
|---|---|
| End of the center position in the TSS region: | 128192066 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | NM_001257975 AK296363 |
|---|---|
| Distance: | -38 |
| Num_trans: | 18 |
| All_trans: | NM_001257975:-38 AK296363:-38 ENST00000538431.5:127 ENST00000324544.6:289 ENST00000357558.9:477 AK292713:486 AK316393:486 ENST00000372938.10:494 ENST00000629610.2:494 NM_001131018:494 NM_001131017:494 NM_001257976:494 NM_001131016:494 AK303288:494 AK303636:494 AK027287:494 ENST00000372954.5:498 BC021163:498 |
TATA-Box annotation
| Distance to TSS: | 5106 |
|---|---|
| Nearest PromoterID: | NM_001206847 |
| Entrez ID: | 100507341 |
| Nearest Unigene: | Hs.659493 |
| Nearest Refseq: | NM_001206847 |
| Nearest Ensembl: | ENSG00000253457 |
| Gene Name: | CDKN1A interacting zinc finger protein 1 |
| Gene Alias: | - |
| Gene Description: | small integral membrane protein 18 |
| Gene Type: | protein-coding |
| CpG%: | 0.005 |
| GC%: | 0.393035 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
