Difference between revisions of "TSS:Hg 243191.1"
From referenceTSS
| Line 4: | Line 4: | ||
|PPP1R131= | |PPP1R131= | ||
|all_trans=AK303976:103 ENST00000371482.5:154 AL389945:154 ENST00000371468.1:318 ENST00000484316.5:378 BC016862:-480 AL389944:-487 | |all_trans=AK303976:103 ENST00000371482.5:154 AL389945:154 ENST00000371468.1:318 ENST00000484316.5:378 BC016862:-480 AL389944:-487 | ||
| − | |chr= | + | |chr=chr9 |
|cpg_percent=0.12 | |cpg_percent=0.12 | ||
|distance=103 | |distance=103 | ||
|distance_to_tss=24 | |distance_to_tss=24 | ||
| − | |end= | + | |end=137454810 |
|end_of_center_position=137454810 | |end_of_center_position=137454810 | ||
|entrez_id=9821 | |entrez_id=9821 | ||
| Line 27: | Line 27: | ||
|num_trans=7 | |num_trans=7 | ||
|species=human | |species=human | ||
| − | |start= | + | |start=137454809 |
|start_of_center_position=137454809 | |start_of_center_position=137454809 | ||
| − | |strand= | + | |strand=- |
|transcript_name=AK303976 | |transcript_name=AK303976 | ||
|tss_classification=yes | |tss_classification=yes | ||
Revision as of 12:45, 14 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 137454809 |
|---|---|
| End of the center position in the TSS region: | 137454810 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | AK303976 |
|---|---|
| Distance: | 103 |
| Num_trans: | 7 |
| All_trans: | AK303976:103 ENST00000371482.5:154 AL389945:154 ENST00000371468.1:318 ENST00000484316.5:378 BC016862:-480 AL389944:-487 |
TATA-Box annotation
| Distance to TSS: | 24 |
|---|---|
| Nearest PromoterID: | NM_014781 |
| Entrez ID: | 9821 |
| Nearest Unigene: | Hs.196102 |
| Nearest Refseq: | NM_014781 |
| Nearest Ensembl: | ENSG00000023287 |
| Gene Name: | NMDA receptor synaptonuclear signaling and neuronal migration factor |
| Gene Alias: | ATG17|CC1|FIP200|PPP1R131 |
| Gene Description: | RB1 inducible coiled-coil 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.12 |
| GC%: | 0.721393 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
