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Difference between revisions of "TSS:Hg 243220.1"

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Line 1: Line 1:
 
{{TSSDetail
 
{{TSSDetail
 
|all_trans=BC143889:7 BC069622:-20 ENST00000341998.6:-32 ENST00000286344.3:-32 AF097366:-32 AF177987:-32
 
|all_trans=BC143889:7 BC069622:-20 ENST00000341998.6:-32 ENST00000286344.3:-32 AF097366:-32 AF177987:-32
|chr=chr8
+
|chr=chr9
 
|cpg_percent=0
 
|cpg_percent=0
 
|distance=7
 
|distance=7
 
|distance_to_tss=346509
 
|distance_to_tss=346509
|end=62595366
+
|end=19786896
 
|end_of_center_position=19786896
 
|end_of_center_position=19786896
 
|entrez_id=286183
 
|entrez_id=286183
Line 24: Line 24:
 
|num_trans=6
 
|num_trans=6
 
|species=human
 
|species=human
|start=62595360
+
|start=19786895
 
|start_of_center_position=19786895
 
|start_of_center_position=19786895
|strand=+
+
|strand=-
 
|transcript_name=BC143889
 
|transcript_name=BC143889
 
|tss_classification=no
 
|tss_classification=no

Revision as of 12:45, 14 July 2021

Basic information about the TSS


TSS ID:hg_243220.1
Species:human
Chr:chr9
TSS Classification:no
Start:19786895
End:19786896
Strand:-
TSS Score:1
Start of the center position in the TSS region:19786895
End of the center position in the TSS region:19786896



Gene and protein annotation


Transcript_name:BC143889
Distance:7
GeneID:25769
HGNC/MGI_ID:HGNC:10976
UniProt_ID:
Gene_name:solute carrier family 24 member 2
Gene_symbol:SLC24A2
Gene_synonyms:NCKX2
Gene_source:HGNC:10976



Transcript annotation


Transcript_name:BC143889
Distance:7
Num_trans:6
All_trans:BC143889:7 BC069622:-20 ENST00000341998.6:-32 ENST00000286344.3:-32 AF097366:-32 AF177987:-32



TATA-Box annotation


Distance to TSS:346509
Nearest PromoterID:NM_001304533
Entrez ID:286183
Nearest Unigene:Hs.654662
Nearest Refseq:NM_173688
Nearest Ensembl:ENSG00000185942
Gene Name:solute carrier family 24 member 2
Gene Alias:FAM77D
Gene Description:sodium/potassium transporting ATPase interacting 3
Gene Type:protein-coding
CpG%:0
GC%:0.333333
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):