Difference between revisions of "TSS:Hg 100886.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.025 |distance_to_tss=2 |entrez_id=80036 |gc_percent=0.462687 |gene_alias=GON-2|LTRPC3|MLSN2 |gene_description=transient receptor potential cation ch...") |
|||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| + | |LTRPC3= | ||
| + | |MLSN2= | ||
| + | |all_trans=ENST00000377105.5:0 ENST00000360823.6:0 ENST00000377101.5:0 NM_206947:0 NM_206946:0 NM_206945:0 NM_020952:0 NM_206944:0 NM_024971:0 NM_206948:0 NM_001007470:0 uc004ahy.5:0 uc004ahx.5:0 uc004aie.4:0 BC094699:0 AK225732:0 AK021788:0 BC142972:-4 ENST00000361823.9:14 uc004aig.4:14 AF325212:14 ENST00000396283.5:20 uc064trm.1:20 BC067733:25 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.025 | |cpg_percent=0.025 | ||
| + | |distance=0 | ||
|distance_to_tss=2 | |distance_to_tss=2 | ||
| + | |end=70869069 | ||
|entrez_id=80036 | |entrez_id=80036 | ||
|gc_percent=0.462687 | |gc_percent=0.462687 | ||
|gene_alias=GON-2|LTRPC3|MLSN2 | |gene_alias=GON-2|LTRPC3|MLSN2 | ||
|gene_description=transient receptor potential cation channel subfamily M member 3 | |gene_description=transient receptor potential cation channel subfamily M member 3 | ||
| − | |gene_name=TRPM3 | + | |gene_id=80036 |
| + | |gene_name=transient receptor potential cation channel subfamily M member 3 | ||
| + | |gene_source=HGNC:17992 | ||
| + | |gene_symbol=TRPM3 | ||
| + | |gene_synonyms=GON-2 KIAA1616 LTRPC3 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:17992 | ||
|nearest_ensembl=ENSG00000083067 | |nearest_ensembl=ENSG00000083067 | ||
|nearest_promoter_id=NM_206946 | |nearest_promoter_id=NM_206946 | ||
|nearest_refseq=NM_020952 | |nearest_refseq=NM_020952 | ||
|nearest_unigene=Hs.47288 | |nearest_unigene=Hs.47288 | ||
| + | |num_trans=24 | ||
| + | |species=human | ||
| + | |start=70869042 | ||
| + | |strand=- | ||
| + | |transcript_name=ENST00000377105.5 ENST00000360823.6 ENST00000377101.5 NM_206947 NM_206946 NM_206945 NM_020952 NM_206944 NM_024971 NM_206948 NM_001007470 uc004ahy.5 uc004ahx.5 uc004aie.4 BC094699 AK225732 AK021788 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_100886.1 | |tss_id=hg_100886.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=A2A3F4 E9PBI7 G5E9G1 H7BYP1 Q504Y1 Q9H200 Q9HAF4 Q9HCF6 | ||
}} | }} | ||
Revision as of 18:19, 8 March 2018
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000377105.5 ENST00000360823.6 ENST00000377101.5 NM_206947 NM_206946 NM_206945 NM_020952 NM_206944 NM_024971 NM_206948 NM_001007470 uc004ahy.5 uc004ahx.5 uc004aie.4 BC094699 AK225732 AK021788 |
|---|---|
| Distance: | 0 |
| Num_trans: | 24 |
| All_trans: | ENST00000377105.5:0 ENST00000360823.6:0 ENST00000377101.5:0 NM_206947:0 NM_206946:0 NM_206945:0 NM_020952:0 NM_206944:0 NM_024971:0 NM_206948:0 NM_001007470:0 uc004ahy.5:0 uc004ahx.5:0 uc004aie.4:0 BC094699:0 AK225732:0 AK021788:0 BC142972:-4 ENST00000361823.9:14 uc004aig.4:14 AF325212:14 ENST00000396283.5:20 uc064trm.1:20 BC067733:25 |
TATA-Box annotation
| Distance to TSS: | 2 |
|---|---|
| Nearest PromoterID: | NM_206946 |
| Entrez ID: | 80036 |
| Nearest Unigene: | Hs.47288 |
| Nearest Refseq: | NM_020952 |
| Nearest Ensembl: | ENSG00000083067 |
| Gene Name: | transient receptor potential cation channel subfamily M member 3 |
| Gene Alias: | GON-2 |
| Gene Description: | transient receptor potential cation channel subfamily M member 3 |
| Gene Type: | protein-coding |
| CpG%: | 0.025 |
| GC%: | 0.462687 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
