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Difference between revisions of "TSS:Hg 62321.1"

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{{TSSDetail
 
{{TSSDetail
|all_trans=ENST00000512287.1:0 ENST00000656836.1:0 ENST00000663467.1:0 ENST00000660242.1:4 ENST00000511495.1:13 ENST00000500148.6:-13 AK092460:-13 AK096014:13 ENST00000670957.1:-22 ENST00000501927.2:-24 ENST00000503483.6:25 ENST00000502041.2:-28 AK096680:-28 ENST00000505295.1:-29 ENST00000669977.1:-34 ENST00000663674.1:38 NR_034121:-38 NR_034122:-38 NR_034123:-38
+
|all_trans=HGNC:48997
 
|chr=chr5
 
|chr=chr5
 
|cpg_percent=0.085
 
|cpg_percent=0.085
Line 22: Line 22:
 
|nearest_refseq=NR_034121
 
|nearest_refseq=NR_034121
 
|nearest_unigene=Hs.655855
 
|nearest_unigene=Hs.655855
|num_trans=19
+
|num_trans=100131067
 
|species=human
 
|species=human
 
|start=81301509
 
|start=81301509

Latest revision as of 05:06, 22 July 2021

Basic information about the TSS


TSS ID:hg_62321.1
Species:human
Chr:chr5
TSS Classification:yes
Start:81301509
End:81301531
Strand:-
TSS Score:1
Start of the center position in the TSS region:81301520
End of the center position in the TSS region:81301521



Gene and protein annotation


Transcript_name:ENST00000512287.1 ENST00000656836.1 ENST00000663467.1
Distance:0
GeneID:100131067
HGNC/MGI_ID:HGNC:48997
UniProt_ID:
Gene_name:CKMT2 antisense RNA 1
Gene_symbol:CKMT2-AS1
Gene_synonyms:
Gene_source:HGNC:48997



Transcript annotation


Transcript_name:ENST00000512287.1 ENST00000656836.1 ENST00000663467.1
Distance:0
Num_trans:100131067
All_trans:HGNC:48997



TATA-Box annotation


Distance to TSS:49
Nearest PromoterID:NR_034121
Entrez ID:100131067
Nearest Unigene:Hs.655855
Nearest Refseq:NR_034121
Nearest Ensembl:ENSG00000247572
Gene Name:CKMT2 antisense RNA 1
Gene Alias:-
Gene Description:CKMT2 antisense RNA 1
Gene Type:ncRNA
CpG%:0.085
GC%:0.567164
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):