Difference between revisions of "TSS:Hg 100937.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.055 |distance_to_tss=75 |entrez_id=51104 |gc_percent=0.651741 |gene_alias=C9orf77|CGI-67|FAM108B1 |gene_description=abhydrolase domain containing 17...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |CGI-67= | ||
| + | |FAM108B1= | ||
| + | |all_trans=BC044576:-17 NM_016014:-69 NM_001025780:-69 AK293060:-69 ENST00000377041.6:234 uc004ail.4:234 AF151825:260 ENST00000333421.6:423 uc004aim.2:423 BC038390:423 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.055 | |cpg_percent=0.055 | ||
| + | |distance=-17 | ||
|distance_to_tss=75 | |distance_to_tss=75 | ||
| + | |end=71911176 | ||
|entrez_id=51104 | |entrez_id=51104 | ||
|gc_percent=0.651741 | |gc_percent=0.651741 | ||
|gene_alias=C9orf77|CGI-67|FAM108B1 | |gene_alias=C9orf77|CGI-67|FAM108B1 | ||
|gene_description=abhydrolase domain containing 17B | |gene_description=abhydrolase domain containing 17B | ||
| − | |gene_name=ABHD17B | + | |gene_id=51104 |
| + | |gene_name=abhydrolase domain containing 17B | ||
| + | |gene_source=HGNC:24278 | ||
| + | |gene_symbol=ABHD17B | ||
| + | |gene_synonyms=CGI-67 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:24278 | ||
|nearest_ensembl=ENSG00000107362 | |nearest_ensembl=ENSG00000107362 | ||
|nearest_promoter_id=NM_001025780 | |nearest_promoter_id=NM_001025780 | ||
|nearest_refseq=NM_016014 | |nearest_refseq=NM_016014 | ||
|nearest_unigene=Hs.380389 | |nearest_unigene=Hs.380389 | ||
| + | |num_trans=10 | ||
| + | |species=human | ||
| + | |start=71911164 | ||
| + | |strand=- | ||
| + | |transcript_name=BC044576 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_100937.1 | |tss_id=hg_100937.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Revision as of 18:21, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | BC044576 |
|---|---|
| Distance: | -17 |
| Num_trans: | 10 |
| All_trans: | BC044576:-17 NM_016014:-69 NM_001025780:-69 AK293060:-69 ENST00000377041.6:234 uc004ail.4:234 AF151825:260 ENST00000333421.6:423 uc004aim.2:423 BC038390:423 |
TATA-Box annotation
| Distance to TSS: | 75 |
|---|---|
| Nearest PromoterID: | NM_001025780 |
| Entrez ID: | 51104 |
| Nearest Unigene: | Hs.380389 |
| Nearest Refseq: | NM_016014 |
| Nearest Ensembl: | ENSG00000107362 |
| Gene Name: | abhydrolase domain containing 17B |
| Gene Alias: | C9orf77 |
| Gene Description: | abhydrolase domain containing 17B |
| Gene Type: | protein-coding |
| CpG%: | 0.055 |
| GC%: | 0.651741 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
