Difference between revisions of "TSS:Mm 100078.1"
From referenceTSS
| Line 3: | Line 3: | ||
|MCT 6= | |MCT 6= | ||
|MCT5= | |MCT5= | ||
| − | |all_trans= | + | |all_trans=MGI:2443515 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.025 | |cpg_percent=0.025 | ||
| Line 25: | Line 25: | ||
|nearest_refseq=NM_001080934 | |nearest_refseq=NM_001080934 | ||
|nearest_unigene=Mm.25773 | |nearest_unigene=Mm.25773 | ||
| − | |num_trans= | + | |num_trans=217316 |
|species=mouse | |species=mouse | ||
|start=115463767 | |start=115463767 | ||
|start_of_center_position=115463775 | |start_of_center_position=115463775 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENSMUST00000133636.7 | + | |transcript_name=ENSMUST00000133636.7 BC052932 BC053982 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=mm_100078.1 | |tss_id=mm_100078.1 | ||
Latest revision as of 10:30, 26 July 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 115463775 |
|---|---|
| End of the center position in the TSS region: | 115463776 |
Gene and protein annotation
|
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Transcript annotation
| Transcript_name: | ENSMUST00000133636.7 BC052932 BC053982 |
|---|---|
| Distance: | 16 |
| Num_trans: | 217316 |
| All_trans: | MGI:2443515 |
TATA-Box annotation
| Distance to TSS: | -24 |
|---|---|
| Nearest PromoterID: | NM_001359609 |
| Entrez ID: | 217316 |
| Nearest Unigene: | Mm.25773 |
| Nearest Refseq: | NM_001080934 |
| Nearest Ensembl: | ENSMUSG00000045775 |
| Gene Name: | solute carrier family 16 (monocarboxylic acid transporters), member 5 |
| Gene Alias: | A130015N09Rik|MCT 5|MCT 6|MCT5 |
| Gene Description: | solute carrier family 16 (monocarboxylic acid transporters), member 5 |
| Gene Type: | protein-coding |
| CpG%: | 0.025 |
| GC%: | 0.512438 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
