Difference between revisions of "TSS:Mm 100227.1"
From referenceTSS
| Line 31: | Line 31: | ||
|tata_box=-70(TACCTTAAAGGG,-,0.00),-68(CCTTAAAGGGGA,+,0.00) | |tata_box=-70(TACCTTAAAGGG,-,0.00),-68(CCTTAAAGGGGA,+,0.00) | ||
|transcript_name=AK213489 | |transcript_name=AK213489 | ||
| − | |tss_classification= | + | |tss_classification=yes |
|tss_id=mm_100227.1 | |tss_id=mm_100227.1 | ||
|tss_score=1 | |tss_score=1 | ||
|uniprot_id= | |uniprot_id= | ||
}} | }} | ||
Revision as of 09:55, 16 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 117143840 |
|---|---|
| End of the center position in the TSS region: | 117143841 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | AK213489 |
|---|---|
| Distance: | -34 |
| Num_trans: | 1 |
| All_trans: | AK213489:-34 |
TATA-Box annotation
| Distance to TSS: | 7833 |
|---|---|
| Nearest PromoterID: | NM_001363165 |
| Entrez ID: | 74136 |
| Nearest Unigene: | Mm.272312 |
| Nearest Refseq: | NM_028777 |
| Nearest Ensembl: | ENSMUSG00000020823 |
| Gene Name: | SEC14-like lipid binding 1 |
| Gene Alias: | 1200017E04Rik|2810012L19Rik|Naa-35 |
| Gene Description: | SEC14-like lipid binding 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.03 |
| GC%: | 0.567164 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -70(TACCTTAAAGGG,-,0.00),-68(CCTTAAAGGGGA,+,0.00) |
