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Difference between revisions of "TSS:Hg 196735.1"

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(Created page with "{{TSSDetail |all_trans=NM_001039840:0 NM_001300884:0 AK295903:0 ENST00000373504.10:47 uc004ebl.5:47 CR936642:47 ENST00000373502.9:55 uc004ebk.5:55 BC127727:84 BC127728:84 BC13...")
 
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|distance_to_tss=0
 
|distance_to_tss=0
 
|end=73563153
 
|end=73563153
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|end_of_center_position=73563148
 
|entrez_id=53344
 
|entrez_id=53344
 
|gc_percent=0.636816
 
|gc_percent=0.636816
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|species=human
 
|species=human
 
|start=73563142
 
|start=73563142
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|start_of_center_position=73563147
 
|strand=+
 
|strand=+
 
|transcript_name=NM_001039840 NM_001300884 AK295903
 
|transcript_name=NM_001039840 NM_001300884 AK295903

Revision as of 22:22, 11 May 2019

Basic information about the TSS


TSS ID:hg_196735.1
Species:human
Chr:chrX
TSS Classification:yes
Start:73563142
End:73563153
Strand:+
TSS Score:1
Start of the center position in the TSS region:73563147
End of the center position in the TSS region:73563148



Gene and protein annotation


Transcript_name:NM_001039840 NM_001300884 AK295903
Distance:0
GeneID:53344
HGNC/MGI_ID:HGNC:1934
UniProt_ID:B7Z3I1 Q5VXU3
Gene_name:cysteine rich hydrophobic domain 1
Gene_symbol:CHIC1
Gene_synonyms:BRX
Gene_source:HGNC:1934



Transcript annotation


Transcript_name:NM_001039840 NM_001300884 AK295903
Distance:0
Num_trans:20
All_trans:NM_001039840:0 NM_001300884:0 AK295903:0 ENST00000373504.10:47 uc004ebl.5:47 CR936642:47 ENST00000373502.9:55 uc004ebk.5:55 BC127727:84 BC127728:84 BC136691:90 BC136692:90 ENST00000498407.5:129 uc064zye.1:129 AB529212:132 AK297768:138 ENST00000498318.1:299 uc064zyf.1:299 BC050300:299 AL832095:356



TATA-Box annotation


Distance to TSS:0
Nearest PromoterID:NM_001300884
Entrez ID:53344
Nearest Unigene:Hs.496323
Nearest Refseq:NM_001039840
Nearest Ensembl:ENSG00000204116
Gene Name:cysteine rich hydrophobic domain 1
Gene Alias:BRX
Gene Description:cysteine rich hydrophobic domain 1
Gene Type:protein-coding
CpG%:0.055
GC%:0.636816
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):