Difference between revisions of "TSS:Hg 111739.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.195 |distance_to_tss=87 |entrez_id=2263 |gc_percent=0.850746 |gene_alias=BBDS|BEK|BFR-1|CD332|CEK3|CFD1|ECT1|JWS|K-SAM|KGFR|TK14|TK25 |gene_descript...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |BEK= | ||
| + | |BFR-1= | ||
| + | |CD332= | ||
| + | |CEK3= | ||
| + | |CFD1= | ||
| + | |ECT1= | ||
| + | |JWS= | ||
| + | |K-SAM= | ||
| + | |KGFR= | ||
| + | |TK14= | ||
| + | |TK25= | ||
| + | |all_trans=ENST00000336553.10:-15 uc057wli.1:-15 M35718:-17 ENST00000457416.6:-22 uc057wle.1:-22 M97193:-22 BC096749:-29 ENST00000604236.5:-32 uc057wky.1:-32 ENST00000360144.7:-51 uc057wlf.1:-51 AK026508:-51 ENST00000369060.8:63 ENST00000359354.6:63 uc010qtl.3:63 uc057wll.1:63 M87771:63 ENST00000369059.5:-71 uc057wkz.1:-71 ENST00000613048.4:-77 ENST00000356226.8:-77 NR_073009:-77 NM_000141:-77 NM_001144918:-77 NM_001144917:-77 NM_022970:-77 NM_001320658:-77 NM_001144919:-77 uc057wkv.1:-77 uc010qtm.3:-77 BC039243:-77 ENST00000369058.7:127 uc057wlh.1:127 AB030073:127 M80634:127 AB030075:127 AB030074:127 AB030076:127 AB030077:127 AB030078:127 M87772:275 ENST00000358487.9:277 uc057wkw.1:277 M87770:277 ENST00000490349.5:289 uc057wlk.1:289 U11814:289 X52832:371 | ||
| + | |chr=chr10 | ||
|cpg_percent=0.195 | |cpg_percent=0.195 | ||
| + | |distance=-15 | ||
|distance_to_tss=87 | |distance_to_tss=87 | ||
| + | |end=121598381 | ||
|entrez_id=2263 | |entrez_id=2263 | ||
|gc_percent=0.850746 | |gc_percent=0.850746 | ||
|gene_alias=BBDS|BEK|BFR-1|CD332|CEK3|CFD1|ECT1|JWS|K-SAM|KGFR|TK14|TK25 | |gene_alias=BBDS|BEK|BFR-1|CD332|CEK3|CFD1|ECT1|JWS|K-SAM|KGFR|TK14|TK25 | ||
|gene_description=fibroblast growth factor receptor 2 | |gene_description=fibroblast growth factor receptor 2 | ||
| − | |gene_name=FGFR2 | + | |gene_id=2263 |
| + | |gene_name=fibroblast growth factor receptor 2 | ||
| + | |gene_source=HGNC:3689 | ||
| + | |gene_symbol=FGFR2 | ||
| + | |gene_synonyms=CD332 CEK3 ECT1 K-SAM TK14 TK25 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:3689 | ||
|nearest_ensembl=ENSG00000066468 | |nearest_ensembl=ENSG00000066468 | ||
|nearest_promoter_id=NM_022970 | |nearest_promoter_id=NM_022970 | ||
|nearest_refseq=NM_000141 | |nearest_refseq=NM_000141 | ||
|nearest_unigene=Hs.533683 | |nearest_unigene=Hs.533683 | ||
| + | |num_trans=48 | ||
| + | |species=human | ||
| + | |start=121598360 | ||
| + | |strand=- | ||
| + | |transcript_name=ENST00000336553.10 uc057wli.1 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_111739.1 | |tss_id=hg_111739.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=H7BXU9 | ||
}} | }} | ||
Revision as of 02:05, 9 March 2018
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000336553.10 uc057wli.1 |
|---|---|
| Distance: | -15 |
| Num_trans: | 48 |
| All_trans: | ENST00000336553.10:-15 uc057wli.1:-15 M35718:-17 ENST00000457416.6:-22 uc057wle.1:-22 M97193:-22 BC096749:-29 ENST00000604236.5:-32 uc057wky.1:-32 ENST00000360144.7:-51 uc057wlf.1:-51 AK026508:-51 ENST00000369060.8:63 ENST00000359354.6:63 uc010qtl.3:63 uc057wll.1:63 M87771:63 ENST00000369059.5:-71 uc057wkz.1:-71 ENST00000613048.4:-77 ENST00000356226.8:-77 NR_073009:-77 NM_000141:-77 NM_001144918:-77 NM_001144917:-77 NM_022970:-77 NM_001320658:-77 NM_001144919:-77 uc057wkv.1:-77 uc010qtm.3:-77 BC039243:-77 ENST00000369058.7:127 uc057wlh.1:127 AB030073:127 M80634:127 AB030075:127 AB030074:127 AB030076:127 AB030077:127 AB030078:127 M87772:275 ENST00000358487.9:277 uc057wkw.1:277 M87770:277 ENST00000490349.5:289 uc057wlk.1:289 U11814:289 X52832:371 |
TATA-Box annotation
| Distance to TSS: | 87 |
|---|---|
| Nearest PromoterID: | NM_022970 |
| Entrez ID: | 2263 |
| Nearest Unigene: | Hs.533683 |
| Nearest Refseq: | NM_000141 |
| Nearest Ensembl: | ENSG00000066468 |
| Gene Name: | fibroblast growth factor receptor 2 |
| Gene Alias: | BBDS |
| Gene Description: | fibroblast growth factor receptor 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.195 |
| GC%: | 0.850746 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
