Difference between revisions of "TSS:Hg 197425.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| + | |ZNF348= | ||
|all_trans=BX538101:-45 AK312321:-57 AL833604:-59 BX538016:-73 ENST00000557385.1:-116 NM_001184742:-116 uc010nqm.2:-116 ENST00000326624.2:-119 NM_006777:-119 uc004esn.2:-119 BC042753:-119 | |all_trans=BX538101:-45 AK312321:-57 AL833604:-59 BX538016:-73 ENST00000557385.1:-116 NM_001184742:-116 uc010nqm.2:-116 ENST00000326624.2:-119 NM_006777:-119 uc004esn.2:-119 BC042753:-119 | ||
|chr=chrX | |chr=chrX | ||
| Line 6: | Line 7: | ||
|distance_to_tss=121 | |distance_to_tss=121 | ||
|end=120250881 | |end=120250881 | ||
| + | |end_of_center_position=120250876 | ||
|entrez_id=10009 | |entrez_id=10009 | ||
|gc_percent=0.696517 | |gc_percent=0.696517 | ||
| − | |gene_alias=ZNF-kaiso | + | |gene_alias=ZNF-kaiso |
|gene_description=zinc finger and BTB domain containing 33 | |gene_description=zinc finger and BTB domain containing 33 | ||
|gene_id=10009 | |gene_id=10009 | ||
| Line 24: | Line 26: | ||
|species=human | |species=human | ||
|start=120250870 | |start=120250870 | ||
| + | |start_of_center_position=120250875 | ||
|strand=+ | |strand=+ | ||
|transcript_name=BX538101 | |transcript_name=BX538101 | ||
Revision as of 00:51, 12 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 120250875 |
|---|---|
| End of the center position in the TSS region: | 120250876 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | BX538101 |
|---|---|
| Distance: | -45 |
| Num_trans: | 11 |
| All_trans: | BX538101:-45 AK312321:-57 AL833604:-59 BX538016:-73 ENST00000557385.1:-116 NM_001184742:-116 uc010nqm.2:-116 ENST00000326624.2:-119 NM_006777:-119 uc004esn.2:-119 BC042753:-119 |
TATA-Box annotation
| Distance to TSS: | 121 |
|---|---|
| Nearest PromoterID: | NM_001184742 |
| Entrez ID: | 10009 |
| Nearest Unigene: | Hs.143604 |
| Nearest Refseq: | NM_006777 |
| Nearest Ensembl: | ENSG00000177485 |
| Gene Name: | zinc finger and BTB domain containing 33 |
| Gene Alias: | ZNF-kaiso |
| Gene Description: | zinc finger and BTB domain containing 33 |
| Gene Type: | protein-coding |
| CpG%: | 0.13 |
| GC%: | 0.696517 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
