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Difference between revisions of "TSS:Mm 1265.1"

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Line 1: Line 1:
 
{{TSSDetail
 
{{TSSDetail
|all_trans=ENSMUST00000184516.1:-478
+
|all_trans=MGI:5530772
 
|chr=chr1
 
|chr=chr1
 
|cpg_percent=0.01
 
|cpg_percent=0.01
Line 22: Line 22:
 
|nearest_refseq=NR_028558
 
|nearest_refseq=NR_028558
 
|nearest_unigene=Mm.484706
 
|nearest_unigene=Mm.484706
|num_trans=1
+
|num_trans=
 
|species=mouse
 
|species=mouse
 
|start=63178460
 
|start=63178460

Latest revision as of 20:09, 26 July 2021

Basic information about the TSS


TSS ID:mm_1265.1
Species:mouse
Chr:chr1
TSS Classification:no
Start:63178460
End:63178480
Strand:+
TSS Score:1
Start of the center position in the TSS region:63178470
End of the center position in the TSS region:63178471



Gene and protein annotation


Transcript_name:ENSMUST00000184516.1
Distance:-478
GeneID:
HGNC/MGI_ID:MGI:5530772
UniProt_ID:
Gene_name:predicted gene, 27390
Gene_symbol:Gm27390
Gene_synonyms:
Gene_source:MGI:5530772



Transcript annotation


Transcript_name:ENSMUST00000184516.1
Distance:-478
Num_trans:
All_trans:MGI:5530772



TATA-Box annotation


Distance to TSS:-553
Nearest PromoterID:NR_028558
Entrez ID:100217464
Nearest Unigene:Mm.484706
Nearest Refseq:NR_028558
Nearest Ensembl:ENSMUSG00000064602
Gene Name:predicted gene, 27390
Gene Alias:MBI-83
Gene Description:small nucleolar RNA, H/ACA box 41
Gene Type:snoRNA
CpG%:0.01
GC%:0.462687
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):-84(GCCTAGAAAGGG,-,0.00)