Difference between revisions of "TSS:Hg 19980.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENST00000623515.2:358 uc010ynx.2:358 NR_027251:359 BC032412:489 |chr=chr2 |cpg_percent=0.125 |distance=358 |distance_to_tss=-236 |end=43226852 |entrez_i...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |ERF-2= | ||
| + | |ERF2= | ||
| + | |RNF162C= | ||
| + | |TIS11D= | ||
|all_trans=ENST00000623515.2:358 uc010ynx.2:358 NR_027251:359 BC032412:489 | |all_trans=ENST00000623515.2:358 uc010ynx.2:358 NR_027251:359 BC032412:489 | ||
|chr=chr2 | |chr=chr2 | ||
| Line 6: | Line 10: | ||
|distance_to_tss=-236 | |distance_to_tss=-236 | ||
|end=43226852 | |end=43226852 | ||
| + | |end_of_center_position=43226842 | ||
|entrez_id=678 | |entrez_id=678 | ||
|gc_percent=0.746269 | |gc_percent=0.746269 | ||
| − | |gene_alias=BRF2 | + | |gene_alias=BRF2 |
|gene_description=ZFP36 ring finger protein like 2 | |gene_description=ZFP36 ring finger protein like 2 | ||
|gene_id=100129726 | |gene_id=100129726 | ||
| Line 24: | Line 29: | ||
|species=human | |species=human | ||
|start=43226831 | |start=43226831 | ||
| + | |start_of_center_position=43226841 | ||
|strand=+ | |strand=+ | ||
|transcript_name=ENST00000623515.2 uc010ynx.2 | |transcript_name=ENST00000623515.2 uc010ynx.2 | ||
Revision as of 09:32, 11 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 43226841 |
|---|---|
| End of the center position in the TSS region: | 43226842 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000623515.2 uc010ynx.2 |
|---|---|
| Distance: | 358 |
| Num_trans: | 4 |
| All_trans: | ENST00000623515.2:358 uc010ynx.2:358 NR_027251:359 BC032412:489 |
TATA-Box annotation
| Distance to TSS: | -236 |
|---|---|
| Nearest PromoterID: | NM_006887 |
| Entrez ID: | 678 |
| Nearest Unigene: | Hs.503093 |
| Nearest Refseq: | NM_006887 |
| Nearest Ensembl: | ENSG00000152518 |
| Gene Name: | long intergenic non-protein coding RNA 1126 |
| Gene Alias: | BRF2 |
| Gene Description: | ZFP36 ring finger protein like 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.125 |
| GC%: | 0.746269 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
