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Difference between revisions of "TSS:Mm 163249.1"

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Line 5: Line 5:
 
|D330027A14Rik=
 
|D330027A14Rik=
 
|F630025I20Rik=
 
|F630025I20Rik=
|all_trans=AK084665:-260 ENSMUST00000103068.9:280 NM_001166685:280 NM_177088:280 AK089185:-280 ENSMUST00000018516.10:303 AK076400:303 AK165351:313 BC116308:314 BC116309:314 ENSMUST00000130019.1:315 BC090675:322 AK052705:353
+
|all_trans=MGI:2443502
 
|chr=chr11
 
|chr=chr11
 
|cpg_percent=0.085
 
|cpg_percent=0.085
Line 27: Line 27:
 
|nearest_refseq=NM_007840
 
|nearest_refseq=NM_007840
 
|nearest_unigene=Mm.491096
 
|nearest_unigene=Mm.491096
|num_trans=13
+
|num_trans=320162
 
|species=mouse
 
|species=mouse
 
|start=106788917
 
|start=106788917

Latest revision as of 09:40, 27 July 2021

Basic information about the TSS


TSS ID:mm_163249.1
Species:mouse
Chr:chr11
TSS Classification:yes
Start:106788917
End:106788972
Strand:+
TSS Score:1
Start of the center position in the TSS region:106788944
End of the center position in the TSS region:106788945



Gene and protein annotation


Transcript_name:AK084665
Distance:-260
GeneID:320162
HGNC/MGI_ID:MGI:2443502
UniProt_ID:
Gene_name:centrosomal protein 95
Gene_symbol:Cep95
Gene_synonyms:4732496G21Rik Ccdc45 F630025I20Rik
Gene_source:MGI:2443502



Transcript annotation


Transcript_name:AK084665
Distance:-260
Num_trans:320162
All_trans:MGI:2443502



TATA-Box annotation


Distance to TSS:-38
Nearest PromoterID:NM_001355676
Entrez ID:13207
Nearest Unigene:Mm.491096
Nearest Refseq:NM_007840
Nearest Ensembl:ENSMUSG00000020719
Gene Name:centrosomal protein 95
Gene Alias:2600009A06Rik|G17P1|HUMP68|Hlr1|p68
Gene Description:DEAD (Asp-Glu-Ala-Asp) box polypeptide 5
Gene Type:protein-coding
CpG%:0.085
GC%:0.621891
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):