Difference between revisions of "TSS:Hg 101030.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.095 |distance_to_tss=48 |entrez_id=54981 |gc_percent=0.726368 |gene_alias=C9orf95|NRK1|bA235O14.2 |gene_description=nicotinamide riboside kinase 1 |...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |NRK1= | ||
| + | |all_trans=ENST00000376811.5:0 uc004ajs.5:0 AK097144:0 AK000566:0 ENST00000490321.1:6 uc064ttz.1:6 ENST00000361092.8:-12 ENST00000494066.1:-12 uc004ajr.5:-12 uc064ttx.1:-12 AK023413:-12 BC001366:16 ENST00000376808.8:-20 NM_017881:-20 NM_001127603:-20 NR_023352:-20 uc004ajt.4:-20 BC036804:-20 BC026243:-24 ENST00000466137.1:330 uc064tty.1:330 | ||
| + | |bA235O14.2= | ||
| + | |chr=chr9 | ||
|cpg_percent=0.095 | |cpg_percent=0.095 | ||
| + | |distance=0 | ||
|distance_to_tss=48 | |distance_to_tss=48 | ||
| + | |end=75088197 | ||
|entrez_id=54981 | |entrez_id=54981 | ||
|gc_percent=0.726368 | |gc_percent=0.726368 | ||
|gene_alias=C9orf95|NRK1|bA235O14.2 | |gene_alias=C9orf95|NRK1|bA235O14.2 | ||
|gene_description=nicotinamide riboside kinase 1 | |gene_description=nicotinamide riboside kinase 1 | ||
| − | |gene_name=NMRK1 | + | |gene_id=54981 |
| + | |gene_name=nicotinamide riboside kinase 1 | ||
| + | |gene_source=HGNC:26057 | ||
| + | |gene_symbol=NMRK1 | ||
| + | |gene_synonyms=FLJ20559 NRK1 bA235O14.2 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:26057 | ||
|nearest_ensembl=ENSG00000106733 | |nearest_ensembl=ENSG00000106733 | ||
|nearest_promoter_id=NM_001127603 | |nearest_promoter_id=NM_001127603 | ||
|nearest_refseq=NM_017881 | |nearest_refseq=NM_017881 | ||
|nearest_unigene=Hs.494186 | |nearest_unigene=Hs.494186 | ||
| + | |num_trans=21 | ||
| + | |species=human | ||
| + | |start=75088140 | ||
| + | |strand=- | ||
| + | |transcript_name=ENST00000376811.5 uc004ajs.5 AK097144 AK000566 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_101030.1 | |tss_id=hg_101030.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=B3KUG3 Q5W125 | ||
}} | }} | ||
Revision as of 18:25, 8 March 2018
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENST00000376811.5 uc004ajs.5 AK097144 AK000566 |
|---|---|
| Distance: | 0 |
| Num_trans: | 21 |
| All_trans: | ENST00000376811.5:0 uc004ajs.5:0 AK097144:0 AK000566:0 ENST00000490321.1:6 uc064ttz.1:6 ENST00000361092.8:-12 ENST00000494066.1:-12 uc004ajr.5:-12 uc064ttx.1:-12 AK023413:-12 BC001366:16 ENST00000376808.8:-20 NM_017881:-20 NM_001127603:-20 NR_023352:-20 uc004ajt.4:-20 BC036804:-20 BC026243:-24 ENST00000466137.1:330 uc064tty.1:330 |
TATA-Box annotation
| Distance to TSS: | 48 |
|---|---|
| Nearest PromoterID: | NM_001127603 |
| Entrez ID: | 54981 |
| Nearest Unigene: | Hs.494186 |
| Nearest Refseq: | NM_017881 |
| Nearest Ensembl: | ENSG00000106733 |
| Gene Name: | nicotinamide riboside kinase 1 |
| Gene Alias: | C9orf95 |
| Gene Description: | nicotinamide riboside kinase 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.095 |
| GC%: | 0.726368 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
