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Difference between revisions of "TSS:Hg 219737.1"

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(Created page with "{{TSSDetail |all_trans=JN681271:-39 AK057806:-39 ENST00000379995.1:50 uc064smm.1:50 ENST00000619707.4:-61 ENST00000379997.7:-61 ENST00000461679.1:-61 NM_001256054:-61 NM_14500...")
 
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{{TSSDetail
 
{{TSSDetail
 +
|DENNL72=
 +
|FTDALS=
 +
|FTDALS1=
 
|all_trans=JN681271:-39 AK057806:-39 ENST00000379995.1:50 uc064smm.1:50 ENST00000619707.4:-61 ENST00000379997.7:-61 ENST00000461679.1:-61 NM_001256054:-61 NM_145005:-61 uc022bfa.2:-61 uc003zqr.2:-61 uc064smn.1:-61 NM_018325:312 AK291425:322 ENST00000380003.7:355 uc003zqq.4:355 ENST00000488117.5:357 uc064sml.1:357 AL832467:357 AL832229:358
 
|all_trans=JN681271:-39 AK057806:-39 ENST00000379995.1:50 uc064smm.1:50 ENST00000619707.4:-61 ENST00000379997.7:-61 ENST00000461679.1:-61 NM_001256054:-61 NM_145005:-61 uc022bfa.2:-61 uc003zqr.2:-61 uc064smn.1:-61 NM_018325:312 AK291425:322 ENST00000380003.7:355 uc003zqq.4:355 ENST00000488117.5:357 uc064sml.1:357 AL832467:357 AL832229:358
 
|chr=chr9
 
|chr=chr9
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|distance_to_tss=61
 
|distance_to_tss=61
 
|end=27573805
 
|end=27573805
 +
|end_of_center_position=27573805
 
|entrez_id=203228
 
|entrez_id=203228
 
|gc_percent=0.552239
 
|gc_percent=0.552239
|gene_alias=ALSFTD|DENNL72|FTDALS|FTDALS1
+
|gene_alias=ALSFTD
 
|gene_description=chromosome 9 open reading frame 72
 
|gene_description=chromosome 9 open reading frame 72
 
|gene_id=203228
 
|gene_id=203228
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|species=human
 
|species=human
 
|start=27573804
 
|start=27573804
 +
|start_of_center_position=27573804
 
|strand=-
 
|strand=-
 
|transcript_name=JN681271 AK057806
 
|transcript_name=JN681271 AK057806

Revision as of 05:52, 11 May 2019

Basic information about the TSS


TSS ID:hg_219737.1
Species:human
Chr:chr9
TSS Classification:yes
Start:27573804
End:27573805
Strand:-
TSS Score:1
Start of the center position in the TSS region:27573804
End of the center position in the TSS region:27573805



Gene and protein annotation


Transcript_name:JN681271 AK057806
Distance:-39
GeneID:203228
HGNC/MGI_ID:HGNC:28337
UniProt_ID:
Gene_name:chromosome 9 open reading frame 72
Gene_symbol:C9orf72
Gene_synonyms:MGC23980
Gene_source:HGNC:28337



Transcript annotation


Transcript_name:JN681271 AK057806
Distance:-39
Num_trans:20
All_trans:JN681271:-39 AK057806:-39 ENST00000379995.1:50 uc064smm.1:50 ENST00000619707.4:-61 ENST00000379997.7:-61 ENST00000461679.1:-61 NM_001256054:-61 NM_145005:-61 uc022bfa.2:-61 uc003zqr.2:-61 uc064smn.1:-61 NM_018325:312 AK291425:322 ENST00000380003.7:355 uc003zqq.4:355 ENST00000488117.5:357 uc064sml.1:357 AL832467:357 AL832229:358



TATA-Box annotation


Distance to TSS:61
Nearest PromoterID:NM_145005
Entrez ID:203228
Nearest Unigene:Hs.493639
Nearest Refseq:NM_018325
Nearest Ensembl:ENSG00000147894
Gene Name:chromosome 9 open reading frame 72
Gene Alias:ALSFTD
Gene Description:chromosome 9 open reading frame 72
Gene Type:protein-coding
CpG%:0.07
GC%:0.552239
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):