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Difference between revisions of "TSS:Hg 219752.1"

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(Created page with "{{TSSDetail |all_trans=ENST00000493886.5:-8 uc064svo.1:-8 BC122550:-8 BC121794:-8 BC110913:-11 BC023563:-14 FJ224344:-26 AF100752:-26 FJ224352:-26 BC096751:-60 AK312310:-82 EN...")
 
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{{TSSDetail
 
{{TSSDetail
 +
|CMT2Y=
 +
|HEL-220=
 +
|HEL-S-70=
 +
|IBMPFD=
 +
|IBMPFD1=
 +
|TERA=
 
|all_trans=ENST00000493886.5:-8 uc064svo.1:-8 BC122550:-8 BC121794:-8 BC110913:-11 BC023563:-14 FJ224344:-26 AF100752:-26 FJ224352:-26 BC096751:-60 AK312310:-82 ENST00000448530.5:-86 uc064svs.1:-86 BC012195:-99 BC017171:-99 BC021055:-99 AB385152:184 NM_007126:-201
 
|all_trans=ENST00000493886.5:-8 uc064svo.1:-8 BC122550:-8 BC121794:-8 BC110913:-11 BC023563:-14 FJ224344:-26 AF100752:-26 FJ224352:-26 BC096751:-60 AK312310:-82 ENST00000448530.5:-86 uc064svs.1:-86 BC012195:-99 BC017171:-99 BC021055:-99 AB385152:184 NM_007126:-201
 
|chr=chr9
 
|chr=chr9
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|distance_to_tss=201
 
|distance_to_tss=201
 
|end=35072541
 
|end=35072541
 +
|end_of_center_position=35072541
 
|entrez_id=7415
 
|entrez_id=7415
 
|gc_percent=0.686567
 
|gc_percent=0.686567
|gene_alias=ALS14|CMT2Y|HEL-220|HEL-S-70|IBMPFD|IBMPFD1|TERA|p97
+
|gene_alias=ALS14
 
|gene_description=valosin containing protein
 
|gene_description=valosin containing protein
 
|gene_id=7415
 
|gene_id=7415
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|nearest_unigene=Hs.529782
 
|nearest_unigene=Hs.529782
 
|num_trans=18
 
|num_trans=18
 +
|p97=
 
|species=human
 
|species=human
 
|start=35072540
 
|start=35072540
 +
|start_of_center_position=35072540
 
|strand=-
 
|strand=-
 
|transcript_name=ENST00000493886.5 uc064svo.1 BC122550 BC121794
 
|transcript_name=ENST00000493886.5 uc064svo.1 BC122550 BC121794

Revision as of 06:29, 11 May 2019

Basic information about the TSS


TSS ID:hg_219752.1
Species:human
Chr:chr9
TSS Classification:yes
Start:35072540
End:35072541
Strand:-
TSS Score:1
Start of the center position in the TSS region:35072540
End of the center position in the TSS region:35072541



Gene and protein annotation


Transcript_name:ENST00000493886.5 uc064svo.1 BC122550 BC121794
Distance:-8
GeneID:7415
HGNC/MGI_ID:HGNC:12666
UniProt_ID:Q0IIN5
Gene_name:valosin containing protein
Gene_symbol:VCP
Gene_synonyms:IBMPFD p97
Gene_source:HGNC:12666



Transcript annotation


Transcript_name:ENST00000493886.5 uc064svo.1 BC122550 BC121794
Distance:-8
Num_trans:18
All_trans:ENST00000493886.5:-8 uc064svo.1:-8 BC122550:-8 BC121794:-8 BC110913:-11 BC023563:-14 FJ224344:-26 AF100752:-26 FJ224352:-26 BC096751:-60 AK312310:-82 ENST00000448530.5:-86 uc064svs.1:-86 BC012195:-99 BC017171:-99 BC021055:-99 AB385152:184 NM_007126:-201



TATA-Box annotation


Distance to TSS:201
Nearest PromoterID:NM_007126
Entrez ID:7415
Nearest Unigene:Hs.529782
Nearest Refseq:NM_007126
Nearest Ensembl:ENSG00000165280
Gene Name:valosin containing protein
Gene Alias:ALS14
Gene Description:valosin containing protein
Gene Type:protein-coding
CpG%:0.13
GC%:0.686567
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):