Difference between revisions of "TSS:Hg 101048.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.025 |distance_to_tss=288 |entrez_id=158471 |gc_percent=0.482587 |gene_alias=BMCC1|BNIPXL|C9orf65|KIAA0367 |gene_description=prune homolog 2 |gene_na...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |BNIPXL= | ||
| + | |C9orf65= | ||
| + | |KIAA0367= | ||
| + | |all_trans=ENST00000488346.5:-34 uc064tux.1:-34 ENST00000376717.6:-60 uc064tuo.1:-60 AK299857:-63 AK298805:-64 AK296269:-64 ENST00000466266.6:-67 ENST00000223609.10:-67 uc064tup.1:-67 uc064tuq.1:-67 BC022571:-67 NM_001308051:-282 NM_001308049:-282 NM_001308050:-282 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.025 | |cpg_percent=0.025 | ||
| + | |distance=-34 | ||
|distance_to_tss=288 | |distance_to_tss=288 | ||
| + | |end=76692133 | ||
|entrez_id=158471 | |entrez_id=158471 | ||
|gc_percent=0.482587 | |gc_percent=0.482587 | ||
|gene_alias=BMCC1|BNIPXL|C9orf65|KIAA0367 | |gene_alias=BMCC1|BNIPXL|C9orf65|KIAA0367 | ||
|gene_description=prune homolog 2 | |gene_description=prune homolog 2 | ||
| − | |gene_name=PRUNE2 | + | |gene_id=158471 |
| + | |gene_name=prune homolog 2 (Drosophila) | ||
| + | |gene_source=HGNC:25209 | ||
| + | |gene_symbol=PRUNE2 | ||
| + | |gene_synonyms=A214N16.3 BMCC1 BNIPXL bA214N16.3 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:25209 | ||
|nearest_ensembl=ENSG00000106772 | |nearest_ensembl=ENSG00000106772 | ||
|nearest_promoter_id=NM_001330680 | |nearest_promoter_id=NM_001330680 | ||
|nearest_refseq=NM_015225 | |nearest_refseq=NM_015225 | ||
|nearest_unigene=Hs.262857 | |nearest_unigene=Hs.262857 | ||
| + | |num_trans=15 | ||
| + | |species=human | ||
| + | |start=76692120 | ||
| + | |strand=- | ||
| + | |transcript_name=ENST00000488346.5 uc064tux.1 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_101048.1 | |tss_id=hg_101048.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Revision as of 18:26, 8 March 2018
Basic information about the TSS
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|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000488346.5 uc064tux.1 |
|---|---|
| Distance: | -34 |
| Num_trans: | 15 |
| All_trans: | ENST00000488346.5:-34 uc064tux.1:-34 ENST00000376717.6:-60 uc064tuo.1:-60 AK299857:-63 AK298805:-64 AK296269:-64 ENST00000466266.6:-67 ENST00000223609.10:-67 uc064tup.1:-67 uc064tuq.1:-67 BC022571:-67 NM_001308051:-282 NM_001308049:-282 NM_001308050:-282 |
TATA-Box annotation
| Distance to TSS: | 288 |
|---|---|
| Nearest PromoterID: | NM_001330680 |
| Entrez ID: | 158471 |
| Nearest Unigene: | Hs.262857 |
| Nearest Refseq: | NM_015225 |
| Nearest Ensembl: | ENSG00000106772 |
| Gene Name: | prune homolog 2 (Drosophila) |
| Gene Alias: | BMCC1 |
| Gene Description: | prune homolog 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.025 |
| GC%: | 0.482587 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
