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Difference between revisions of "TSS:Mm 54811.1"

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Line 2: Line 2:
 
|6530406I18Rik=
 
|6530406I18Rik=
 
|AV277466=
 
|AV277466=
|all_trans=ENSMUST00000095974.3:0 AK163654:0 AK158869:0 AK047763:0 AK018206:0 AK018325:0 ENSMUST00000031891.14:-41 NM_001113327:-41 NM_001286584:-41 NM_029528:-41 LF195443:-42 MA431020:-42 ENSMUST00000143278.7:-44 LF202631:-492 MA438208:-492
+
|all_trans=MGI:1923406
 
|chr=chr6
 
|chr=chr6
 
|cpg_percent=0.15
 
|cpg_percent=0.15
Line 24: Line 24:
 
|nearest_refseq=NM_029528
 
|nearest_refseq=NM_029528
 
|nearest_unigene=Mm.234314
 
|nearest_unigene=Mm.234314
|num_trans=15
+
|num_trans=76156
 
|species=mouse
 
|species=mouse
 
|start=42324554
 
|start=42324554

Latest revision as of 03:04, 28 July 2021

Basic information about the TSS


TSS ID:mm_54811.1
Species:mouse
Chr:chr6
TSS Classification:yes
Start:42324554
End:42324599
Strand:-
TSS Score:1
Start of the center position in the TSS region:42324576
End of the center position in the TSS region:42324577



Gene and protein annotation


Transcript_name:ENSMUST00000095974.3 AK163654 AK158869 AK047763 AK018206 AK018325
Distance:0
GeneID:76156
HGNC/MGI_ID:MGI:1923406
UniProt_ID:Q3TY60
Gene_name:family with sequence similarity 131, member B
Gene_symbol:Fam131b
Gene_synonyms:6330503C03Rik 6530406I18Rik
Gene_source:MGI:1923406



Transcript annotation


Transcript_name:ENSMUST00000095974.3 AK163654 AK158869 AK047763 AK018206 AK018325
Distance:0
Num_trans:76156
All_trans:MGI:1923406



TATA-Box annotation


Distance to TSS:63
Nearest PromoterID:NM_001113327
Entrez ID:76156
Nearest Unigene:Mm.234314
Nearest Refseq:NM_029528
Nearest Ensembl:ENSMUSG00000029861
Gene Name:family with sequence similarity 131, member B
Gene Alias:6330503C03Rik|6530406I18Rik|AV277466
Gene Description:family with sequence similarity 131, member B
Gene Type:protein-coding
CpG%:0.15
GC%:0.830846
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):