Difference between revisions of "TSS:Hg 101063.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.115 |distance_to_tss=-20 |entrez_id=158471 |gc_percent=0.731343 |gene_alias=BMCC1|BNIPXL|C9orf65|KIAA0367 |gene_description=prune homolog 2 |gene_na...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |BNIPXL= | ||
| + | |C9orf65= | ||
| + | |KIAA0367= | ||
| + | |all_trans=ENST00000376718.7:4 ENST00000492157.5:4 NM_001308048:4 NM_001308047:4 NR_131751:4 NM_015225:4 uc010mpk.4:4 uc004akn.4:4 BC019095:4 ENST00000376713.3:6 uc064tvb.1:6 ENST00000443509.6:50 ENST00000428286.5:50 uc064tur.1:50 uc064tus.1:50 FJ808772:50 FJ808773:50 KJ903913:127 AB535152:128 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.115 | |cpg_percent=0.115 | ||
| + | |distance=4 | ||
|distance_to_tss=-20 | |distance_to_tss=-20 | ||
| + | |end=76906124 | ||
|entrez_id=158471 | |entrez_id=158471 | ||
|gc_percent=0.731343 | |gc_percent=0.731343 | ||
|gene_alias=BMCC1|BNIPXL|C9orf65|KIAA0367 | |gene_alias=BMCC1|BNIPXL|C9orf65|KIAA0367 | ||
|gene_description=prune homolog 2 | |gene_description=prune homolog 2 | ||
| − | |gene_name=PRUNE2 | + | |gene_id=158471 |
| + | |gene_name=prune homolog 2 (Drosophila) | ||
| + | |gene_source=HGNC:25209 | ||
| + | |gene_symbol=PRUNE2 | ||
| + | |gene_synonyms=A214N16.3 BMCC1 BNIPXL bA214N16.3 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:25209 | ||
|nearest_ensembl=ENSG00000106772 | |nearest_ensembl=ENSG00000106772 | ||
|nearest_promoter_id=NM_001308048 | |nearest_promoter_id=NM_001308048 | ||
|nearest_refseq=NM_015225 | |nearest_refseq=NM_015225 | ||
|nearest_unigene=Hs.262857 | |nearest_unigene=Hs.262857 | ||
| + | |num_trans=19 | ||
| + | |species=human | ||
| + | |start=76906090 | ||
| + | |strand=- | ||
| + | |transcript_name=ENST00000376718.7 ENST00000492157.5 NM_001308048 NM_001308047 NR_131751 NM_015225 uc010mpk.4 uc004akn.4 BC019095 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_101063.1 | |tss_id=hg_101063.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=Q8WUY3 | ||
}} | }} | ||
Revision as of 18:27, 8 March 2018
Basic information about the TSS
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|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENST00000376718.7 ENST00000492157.5 NM_001308048 NM_001308047 NR_131751 NM_015225 uc010mpk.4 uc004akn.4 BC019095 |
|---|---|
| Distance: | 4 |
| Num_trans: | 19 |
| All_trans: | ENST00000376718.7:4 ENST00000492157.5:4 NM_001308048:4 NM_001308047:4 NR_131751:4 NM_015225:4 uc010mpk.4:4 uc004akn.4:4 BC019095:4 ENST00000376713.3:6 uc064tvb.1:6 ENST00000443509.6:50 ENST00000428286.5:50 uc064tur.1:50 uc064tus.1:50 FJ808772:50 FJ808773:50 KJ903913:127 AB535152:128 |
TATA-Box annotation
| Distance to TSS: | -20 |
|---|---|
| Nearest PromoterID: | NM_001308048 |
| Entrez ID: | 158471 |
| Nearest Unigene: | Hs.262857 |
| Nearest Refseq: | NM_015225 |
| Nearest Ensembl: | ENSG00000106772 |
| Gene Name: | prune homolog 2 (Drosophila) |
| Gene Alias: | BMCC1 |
| Gene Description: | prune homolog 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.115 |
| GC%: | 0.731343 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
