Difference between revisions of "TSS:Hg 224228.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENST00000497849.1:-112 uc057sbb.1:-112 ENST00000224237.9:282 ENST00000487938.5:282 uc057sbc.1:282 uc057sbd.1:282 AK222507:282 AK222602:282 AK056766:282...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |HEL113= | ||
|all_trans=ENST00000497849.1:-112 uc057sbb.1:-112 ENST00000224237.9:282 ENST00000487938.5:282 uc057sbc.1:282 uc057sbd.1:282 AK222507:282 AK222602:282 AK056766:282 AK091813:282 AK097336:282 AK098444:282 EU794672:282 X16478:283 AK222482:284 ENST00000485947.1:295 uc057sbe.1:295 AF328728:299 BC030573:303 BC000163:303 Z19554:308 X56134:384 AK290643:402 AB590763:424 CU674070:426 KJ892377:426 CR407690:427 KU178388:427 KU178389:427 ENST00000478746.1:-466 uc057sba.1:-466 | |all_trans=ENST00000497849.1:-112 uc057sbb.1:-112 ENST00000224237.9:282 ENST00000487938.5:282 uc057sbc.1:282 uc057sbd.1:282 AK222507:282 AK222602:282 AK056766:282 AK091813:282 AK097336:282 AK098444:282 EU794672:282 X16478:283 AK222482:284 ENST00000485947.1:295 uc057sbe.1:295 AF328728:299 BC030573:303 BC000163:303 Z19554:308 X56134:384 AK290643:402 AB590763:424 CU674070:426 KJ892377:426 CR407690:427 KU178388:427 KU178389:427 ENST00000478746.1:-466 uc057sba.1:-466 | ||
|chr=chr10 | |chr=chr10 | ||
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|distance_to_tss=729 | |distance_to_tss=729 | ||
|end=17228996 | |end=17228996 | ||
| + | |end_of_center_position=17228989 | ||
|entrez_id=7431 | |entrez_id=7431 | ||
|gc_percent=0.696517 | |gc_percent=0.696517 | ||
| − | |gene_alias=CTRCT30 | + | |gene_alias=CTRCT30 |
|gene_description=vimentin | |gene_description=vimentin | ||
|gene_id=7431 | |gene_id=7431 | ||
| Line 24: | Line 26: | ||
|species=human | |species=human | ||
|start=17228980 | |start=17228980 | ||
| + | |start_of_center_position=17228988 | ||
|strand=+ | |strand=+ | ||
|transcript_name=ENST00000497849.1 uc057sbb.1 | |transcript_name=ENST00000497849.1 uc057sbb.1 | ||
Revision as of 00:25, 12 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 17228988 |
|---|---|
| End of the center position in the TSS region: | 17228989 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000497849.1 uc057sbb.1 |
|---|---|
| Distance: | -112 |
| Num_trans: | 31 |
| All_trans: | ENST00000497849.1:-112 uc057sbb.1:-112 ENST00000224237.9:282 ENST00000487938.5:282 uc057sbc.1:282 uc057sbd.1:282 AK222507:282 AK222602:282 AK056766:282 AK091813:282 AK097336:282 AK098444:282 EU794672:282 X16478:283 AK222482:284 ENST00000485947.1:295 uc057sbe.1:295 AF328728:299 BC030573:303 BC000163:303 Z19554:308 X56134:384 AK290643:402 AB590763:424 CU674070:426 KJ892377:426 CR407690:427 KU178388:427 KU178389:427 ENST00000478746.1:-466 uc057sba.1:-466 |
TATA-Box annotation
| Distance to TSS: | 729 |
|---|---|
| Nearest PromoterID: | NM_003380 |
| Entrez ID: | 7431 |
| Nearest Unigene: | Hs.455493 |
| Nearest Refseq: | NM_003380 |
| Nearest Ensembl: | ENSG00000026025 |
| Gene Name: | vimentin |
| Gene Alias: | CTRCT30 |
| Gene Description: | vimentin |
| Gene Type: | protein-coding |
| CpG%: | 0.08 |
| GC%: | 0.696517 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
