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Difference between revisions of "TSS:Mm 99234.1"

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{{TSSDetail
 
{{TSSDetail
|all_trans=AK211989:4 AK189682:133 AK194754:133 AK195625:133 AK197310:133 AK203635:133 AK217767:-175 AK215150:-175 AK181853:-175 AK199917:-175 AK215725:-175 AK217274:-175 AK219580:-175 AK204616:348 AK180868:-358 AK186683:-358 AK192187:-358 AK204971:-358
+
|all_trans=MGI:103286
 
|chr=chr11
 
|chr=chr11
 
|cpg_percent=0.01
 
|cpg_percent=0.01
Line 22: Line 22:
 
|nearest_refseq=NM_013792
 
|nearest_refseq=NM_013792
 
|nearest_unigene=Mm.95452
 
|nearest_unigene=Mm.95452
|num_trans=18
+
|num_trans=11975
 
|species=mouse
 
|species=mouse
 
|start=101063235
 
|start=101063235

Latest revision as of 19:21, 28 July 2021

Basic information about the TSS


TSS ID:mm_99234.1
Species:mouse
Chr:chr11
TSS Classification:yes
Start:101063235
End:101063255
Strand:+
TSS Score:1
Start of the center position in the TSS region:101063245
End of the center position in the TSS region:101063246



Gene and protein annotation


Transcript_name:AK211989
Distance:4
GeneID:11975
HGNC/MGI_ID:MGI:103286
UniProt_ID:
Gene_name:ATPase, H+ transporting, lysosomal V0 subunit A1
Gene_symbol:Atp6v0a1
Gene_synonyms:Atp6n1 Atp6n1a V-ATPase_a1 Vpp-1 Vpp1
Gene_source:MGI:103286



Transcript annotation


Transcript_name:AK211989
Distance:4
Num_trans:11975
All_trans:MGI:103286



TATA-Box annotation


Distance to TSS:-6849
Nearest PromoterID:NM_013792
Entrez ID:27419
Nearest Unigene:Mm.95452
Nearest Refseq:NM_013792
Nearest Ensembl:ENSMUSG00000001751
Gene Name:ATPase, H+ transporting, lysosomal V0 subunit A1
Gene Alias:-
Gene Description:alpha-N-acetylglucosaminidase (Sanfilippo disease IIIB)
Gene Type:protein-coding
CpG%:0.01
GC%:0.577114
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):