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Difference between revisions of "TSS:Mm 99577.1"

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Line 1: Line 1:
 
{{TSSDetail
 
{{TSSDetail
 
|IMP5=
 
|IMP5=
|all_trans=BC090973:0 BC100418:0 ENSMUST00000107000.1:-19 ENSMUST00000059448.7:-19 NM_199019:-19 NM_001082535:-19 AK077122:-19
+
|all_trans=MGI:3045264
 
|chr=chr11
 
|chr=chr11
 
|cpg_percent=0.01
 
|cpg_percent=0.01
Line 23: Line 23:
 
|nearest_refseq=NM_199019
 
|nearest_refseq=NM_199019
 
|nearest_unigene=Mm.117063
 
|nearest_unigene=Mm.117063
|num_trans=7
+
|num_trans=237958
 
|species=mouse
 
|species=mouse
 
|start=104186345
 
|start=104186345

Latest revision as of 19:29, 28 July 2021

Basic information about the TSS


TSS ID:mm_99577.1
Species:mouse
Chr:chr11
TSS Classification:no
Start:104186345
End:104186358
Strand:+
TSS Score:1
Start of the center position in the TSS region:104186351
End of the center position in the TSS region:104186352



Gene and protein annotation


Transcript_name:BC090973 BC100418
Distance:0
GeneID:237958
HGNC/MGI_ID:MGI:3045264
UniProt_ID:
Gene_name:signal peptide peptidase 2C
Gene_symbol:Sppl2c
Gene_synonyms:4933407P14Rik
Gene_source:MGI:3045264



Transcript annotation


Transcript_name:BC090973 BC100418
Distance:0
Num_trans:237958
All_trans:MGI:3045264



TATA-Box annotation


Distance to TSS:25
Nearest PromoterID:NM_001082535
Entrez ID:237958
Nearest Unigene:Mm.117063
Nearest Refseq:NM_199019
Nearest Ensembl:ENSMUSG00000049506
Gene Name:signal peptide peptidase 2C
Gene Alias:4933407P14Rik|IMP5
Gene Description:signal peptide peptidase 2C
Gene Type:protein-coding
CpG%:0.01
GC%:0.621891
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):