Personal tools

Difference between revisions of "TSS:Mm 9965.1"

From referenceTSS

Jump to: navigation, search
 
Line 1: Line 1:
 
{{TSSDetail
 
{{TSSDetail
|all_trans=D50524:-325 CT010291:-325 LF220746:460 MA456323:460
+
|all_trans=MGI:109384
 
|chr=chr1
 
|chr=chr1
 
|cpg_percent=0.015
 
|cpg_percent=0.015
Line 22: Line 22:
 
|nearest_refseq=NM_007498
 
|nearest_refseq=NM_007498
 
|nearest_unigene=Mm.2706
 
|nearest_unigene=Mm.2706
|num_trans=4
+
|num_trans=11910
 
|species=mouse
 
|species=mouse
 
|start=191177133
 
|start=191177133

Latest revision as of 19:30, 28 July 2021

Basic information about the TSS


TSS ID:mm_9965.1
Species:mouse
Chr:chr1
TSS Classification:no
Start:191177133
End:191177145
Strand:-
TSS Score:1
Start of the center position in the TSS region:191177139
End of the center position in the TSS region:191177140



Gene and protein annotation


Transcript_name:D50524 CT010291
Distance:-325
GeneID:11910
HGNC/MGI_ID:MGI:109384
UniProt_ID:Q62281
Gene_name:activating transcription factor 3
Gene_symbol:Atf3
Gene_synonyms:LRG-21
Gene_source:MGI:109384



Transcript annotation


Transcript_name:D50524 CT010291
Distance:-325
Num_trans:11910
All_trans:MGI:109384



TATA-Box annotation


Distance to TSS:6194
Nearest PromoterID:NM_007498
Entrez ID:11910
Nearest Unigene:Mm.2706
Nearest Refseq:NM_007498
Nearest Ensembl:ENSMUSG00000026628
Gene Name:activating transcription factor 3
Gene Alias:LRG-21
Gene Description:activating transcription factor 3
Gene Type:protein-coding
CpG%:0.015
GC%:0.447761
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):