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Difference between revisions of "TSS:Mm 99919.1"

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Line 3: Line 3:
 
|Prkmk6=
 
|Prkmk6=
 
|SAPKK3=
 
|SAPKK3=
|all_trans=AK162671:0 AK141708:-23 AK140289:-25 AK077712:-34 ENSMUST00000020949.11:-40 ENSMUST00000100260.1:-40 AK053547:-40 AK138757:-40 AK043482:-40 AK086722:-40 NM_011943:-60 NM_001356353:-60 NM_001356352:-60 NM_001356345:-60 ENSMUST00000146084.7:86 U39066:86 X97052:91
+
|all_trans=MGI:1346870
 
|chr=chr11
 
|chr=chr11
 
|cpg_percent=0.03
 
|cpg_percent=0.03
Line 25: Line 25:
 
|nearest_refseq=NM_011943
 
|nearest_refseq=NM_011943
 
|nearest_unigene=Mm.14487
 
|nearest_unigene=Mm.14487
|num_trans=17
+
|num_trans=26399
 
|species=mouse
 
|species=mouse
 
|start=110399161
 
|start=110399161

Latest revision as of 19:36, 28 July 2021

Basic information about the TSS


TSS ID:mm_99919.1
Species:mouse
Chr:chr11
TSS Classification:yes
Start:110399161
End:110399173
Strand:+
TSS Score:1
Start of the center position in the TSS region:110399167
End of the center position in the TSS region:110399168



Gene and protein annotation


Transcript_name:AK162671
Distance:0
GeneID:26399
HGNC/MGI_ID:MGI:1346870
UniProt_ID:
Gene_name:mitogen-activated protein kinase kinase 6
Gene_symbol:Map2k6
Gene_synonyms:MAP_kinase_kinase_6 MKK6 Prkmk6 SAPKK3
Gene_source:MGI:1346870



Transcript annotation


Transcript_name:AK162671
Distance:0
Num_trans:26399
All_trans:MGI:1346870



TATA-Box annotation


Distance to TSS:65
Nearest PromoterID:NM_001356352
Entrez ID:26399
Nearest Unigene:Mm.14487
Nearest Refseq:NM_011943
Nearest Ensembl:ENSMUSG00000020623
Gene Name:mitogen-activated protein kinase kinase 6
Gene Alias:MAPKK 6|MAPKK6|MEK6|MKK6|Prkmk6|SAPKK3
Gene Description:mitogen-activated protein kinase kinase 6
Gene Type:protein-coding
CpG%:0.03
GC%:0.527363
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):