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Difference between revisions of "TSS:Hg 100003.1"

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Line 8: Line 8:
 
|NFIB2=
 
|NFIB2=
 
|NFIB3=
 
|NFIB3=
|all_trans=ENST00000397579.6:0 ENST00000397581.6:49 LF355360:66 MA590937:66 LF355361:-69 MA590938:-69 NR_161382:-335 ENST00000380953.6:427 NM_001369461:427 NM_001369471:427 NM_001369464:427 NM_001369475:427 NM_001369477:427 NM_001190737:427 NM_001369481:427 ENST00000397575.7:499
+
|all_trans=HGNC:7785
 
|chr=chr9
 
|chr=chr9
 
|cpg_percent=0.035
 
|cpg_percent=0.035
Line 30: Line 30:
 
|nearest_refseq=NM_005596
 
|nearest_refseq=NM_005596
 
|nearest_unigene=Hs.644095
 
|nearest_unigene=Hs.644095
|num_trans=16
+
|num_trans=4781
 
|species=human
 
|species=human
 
|start=14314567
 
|start=14314567

Latest revision as of 17:33, 19 July 2021

Basic information about the TSS


TSS ID:hg_100003.1
Species:human
Chr:chr9
TSS Classification:yes
Start:14314567
End:14314619
Strand:-
TSS Score:1
Start of the center position in the TSS region:14314593
End of the center position in the TSS region:14314594



Gene and protein annotation


Transcript_name:ENST00000397579.6
Distance:0
GeneID:4781
HGNC/MGI_ID:HGNC:7785
UniProt_ID:Q5VW27
Gene_name:nuclear factor I B
Gene_symbol:NFIB
Gene_synonyms:NFI-RED NFIB2 NFIB3
Gene_source:HGNC:7785



Transcript annotation


Transcript_name:ENST00000397579.6
Distance:0
Num_trans:4781
All_trans:HGNC:7785



TATA-Box annotation


Distance to TSS:361
Nearest PromoterID:NR_161382
Entrez ID:4781
Nearest Unigene:Hs.644095
Nearest Refseq:NM_005596
Nearest Ensembl:ENSG00000147862
Gene Name:nuclear factor I B
Gene Alias:CTF|HMGIC/NFIB|MACID|NF-I/B|NF1-B|NFI-B|NFI-RED|NFIB2|NFIB3
Gene Description:nuclear factor I B
Gene Type:protein-coding
CpG%:0.035
GC%:0.452736
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):