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Difference between revisions of "TSS:Hg 232795.1"

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Line 4: Line 4:
 
|Fbx44=
 
|Fbx44=
 
|Fbxo6a=
 
|Fbxo6a=
|all_trans=ENST00000642002.1:160 ENST00000641747.1:-185 ENST00000376486.3:200 ENST00000641437.1:257 ENST00000641446.1:261 ENST00000376590.9:299 NM_005957:299 AK312907:299 ENST00000418034.1:327 AY046564:327 BC053509:338 LF206719:-459 MA442296:-459
+
|all_trans=HGNC:7436
 
|chr=chr1
 
|chr=chr1
 
|cpg_percent=0.155
 
|cpg_percent=0.155
Line 26: Line 26:
 
|nearest_refseq=NM_033182
 
|nearest_refseq=NM_033182
 
|nearest_unigene=Hs.556006
 
|nearest_unigene=Hs.556006
|num_trans=13
+
|num_trans=4524
 
|species=human
 
|species=human
 
|start=11806262
 
|start=11806262

Latest revision as of 11:18, 21 July 2021

Basic information about the TSS


TSS ID:hg_232795.1
Species:human
Chr:chr1
TSS Classification:yes
Start:11806262
End:11806270
Strand:-
TSS Score:1
Start of the center position in the TSS region:11806266
End of the center position in the TSS region:11806267



Gene and protein annotation


Transcript_name:ENST00000642002.1
Distance:160
GeneID:4524
HGNC/MGI_ID:HGNC:7436
UniProt_ID:
Gene_name:methylenetetrahydrofolate reductase
Gene_symbol:MTHFR
Gene_synonyms:
Gene_source:HGNC:7436



Transcript annotation


Transcript_name:ENST00000642002.1
Distance:160
Num_trans:4524
All_trans:HGNC:7436



TATA-Box annotation


Distance to TSS:-78
Nearest PromoterID:NM_001304791
Entrez ID:93611
Nearest Unigene:Hs.556006
Nearest Refseq:NM_033182
Nearest Ensembl:ENSG00000132879
Gene Name:methylenetetrahydrofolate reductase
Gene Alias:FBG3|FBX30|FBX6A|Fbx44|Fbxo6a
Gene Description:F-box protein 44
Gene Type:protein-coding
CpG%:0.155
GC%:0.761194
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):