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Difference between revisions of "TSS:Hg 242466.1"

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{{TSSDetail
 
{{TSSDetail
|all_trans=ENST00000491595.1:70 BC001609:88 ENST00000475494.5:97 LF384044:-100 MA619621:-100 AK002099:110 ENST00000398475.5:124 BC006080:124 ENST00000361082.7:149 ENST00000275635.11:149 ENST00000488266.5:149 ENST00000460943.6:149 NM_014146:149 NM_032464:149 NM_032463:149 AF161531:149 AF252611:149 AF252612:149 AF252614:149 AK225150:149 AK290916:152 AK290074:152 AF252613:164 ENST00000470709.1:166 ENST00000344995.9:-461 AK092904:-461
+
|all_trans=HGNC:12749
 
|chr=chr7
 
|chr=chr7
 
|cpg_percent=0.04
 
|cpg_percent=0.04
Line 22: Line 22:
 
|nearest_refseq=NM_001219
 
|nearest_refseq=NM_001219
 
|nearest_unigene=Hs.7753
 
|nearest_unigene=Hs.7753
|num_trans=26
+
|num_trans=7462
 
|species=human
 
|species=human
 
|start=74209856
 
|start=74209856

Latest revision as of 14:48, 21 July 2021

Basic information about the TSS


TSS ID:hg_242466.1
Species:human
Chr:chr7
TSS Classification:yes
Start:74209856
End:74209857
Strand:+
TSS Score:1
Start of the center position in the TSS region:74209856
End of the center position in the TSS region:74209857



Gene and protein annotation


Transcript_name:ENST00000491595.1
Distance:70
GeneID:7462
HGNC/MGI_ID:HGNC:12749
UniProt_ID:
Gene_name:linker for activation of T cells family member 2
Gene_symbol:LAT2
Gene_synonyms:HSPC046 LAB NTAL WSCR5
Gene_source:HGNC:12749



Transcript annotation


Transcript_name:ENST00000491595.1
Distance:70
Num_trans:7462
All_trans:HGNC:12749



TATA-Box annotation


Distance to TSS:14985
Nearest PromoterID:NM_001199673
Entrez ID:813
Nearest Unigene:Hs.7753
Nearest Refseq:NM_001219
Nearest Ensembl:ENSG00000128595
Gene Name:linker for activation of T cells family member 2
Gene Alias:-
Gene Description:calumenin
Gene Type:protein-coding
CpG%:0.04
GC%:0.462687
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):