Difference between revisions of "TSS:Hg 231896.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENST00000354842.4:0 uc065ahw.1:0 BC032236:0 ENST00000442270.5:-10 uc065ahv.1:-10 AK125041:-10 ENST00000455331.5:-13 uc065ahu.1:-13 AK096955:-13 ENST0000...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |GASP4= | ||
|all_trans=ENST00000354842.4:0 uc065ahw.1:0 BC032236:0 ENST00000442270.5:-10 uc065ahv.1:-10 AK125041:-10 ENST00000455331.5:-13 uc065ahu.1:-13 AK096955:-13 ENST00000452188.5:-33 uc065aht.1:-33 AK126987:-33 AK292543:-45 ENST00000445416.5:-212 NR_045862:-212 NR_045864:-212 NR_045863:-212 NR_045861:-212 uc065ahs.1:-212 BC036206:-212 | |all_trans=ENST00000354842.4:0 uc065ahw.1:0 BC032236:0 ENST00000442270.5:-10 uc065ahv.1:-10 AK125041:-10 ENST00000455331.5:-13 uc065ahu.1:-13 AK096955:-13 ENST00000452188.5:-33 uc065aht.1:-33 AK126987:-33 AK292543:-45 ENST00000445416.5:-212 NR_045862:-212 NR_045864:-212 NR_045863:-212 NR_045861:-212 uc065ahs.1:-212 BC036206:-212 | ||
|chr=chrX | |chr=chrX | ||
| Line 6: | Line 7: | ||
|distance_to_tss=217 | |distance_to_tss=217 | ||
|end=101485476 | |end=101485476 | ||
| + | |end_of_center_position=101485471 | ||
|entrez_id=100131755 | |entrez_id=100131755 | ||
|gc_percent=0.736318 | |gc_percent=0.736318 | ||
| − | |gene_alias=CXorf35 | + | |gene_alias=CXorf35 |
|gene_description="armadillo repeat containing, X-linked 4" | |gene_description="armadillo repeat containing, X-linked 4" | ||
|gene_id=100131755 | |gene_id=100131755 | ||
| Line 24: | Line 26: | ||
|species=human | |species=human | ||
|start=101485465 | |start=101485465 | ||
| + | |start_of_center_position=101485470 | ||
|strand=+ | |strand=+ | ||
|transcript_name=ENST00000354842.4 uc065ahw.1 BC032236 | |transcript_name=ENST00000354842.4 uc065ahw.1 BC032236 | ||
Revision as of 23:26, 11 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 101485470 |
|---|---|
| End of the center position in the TSS region: | 101485471 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENST00000354842.4 uc065ahw.1 BC032236 |
|---|---|
| Distance: | 0 |
| Num_trans: | 20 |
| All_trans: | ENST00000354842.4:0 uc065ahw.1:0 BC032236:0 ENST00000442270.5:-10 uc065ahv.1:-10 AK125041:-10 ENST00000455331.5:-13 uc065ahu.1:-13 AK096955:-13 ENST00000452188.5:-33 uc065aht.1:-33 AK126987:-33 AK292543:-45 ENST00000445416.5:-212 NR_045862:-212 NR_045864:-212 NR_045863:-212 NR_045861:-212 uc065ahs.1:-212 BC036206:-212 |
TATA-Box annotation
| Distance to TSS: | 217 |
|---|---|
| Nearest PromoterID: | NR_045863 |
| Entrez ID: | 100131755 |
| Nearest Unigene: | Hs.729062 |
| Nearest Refseq: | NM_152583 |
| Nearest Ensembl: | ENSG00000196440 |
| Gene Name: | "armadillo repeat containing, X-linked 4" |
| Gene Alias: | CXorf35 |
| Gene Description: | "armadillo repeat containing, X-linked 4" |
| Gene Type: | protein-coding |
| CpG%: | 0.115 |
| GC%: | 0.736318 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
