Difference between revisions of "TSS:Hg 101142.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.03 |distance_to_tss=-34290 |entrez_id=105376114 |gc_percent=0.368159 |gene_alias=- |gene_description=uncharacterized LOC105376114 |gene_name=LOC1053...") |
|||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| + | |chr=chr9 | ||
|cpg_percent=0.03 | |cpg_percent=0.03 | ||
| + | |distance= | ||
|distance_to_tss=-34290 | |distance_to_tss=-34290 | ||
| + | |end=83673547 | ||
|entrez_id=105376114 | |entrez_id=105376114 | ||
|gc_percent=0.368159 | |gc_percent=0.368159 | ||
| Line 12: | Line 15: | ||
|nearest_refseq=NR_135839 | |nearest_refseq=NR_135839 | ||
|nearest_unigene=Hs.9589 | |nearest_unigene=Hs.9589 | ||
| + | |num_trans=0 | ||
| + | |species=human | ||
| + | |start=83673543 | ||
| + | |strand=- | ||
|tata_box="-6(TTTTTAAAAGAC,+,0.00)" | |tata_box="-6(TTTTTAAAAGAC,+,0.00)" | ||
| + | |transcript_name= | ||
| + | |tss_classification=no | ||
|tss_id=hg_101142.1 | |tss_id=hg_101142.1 | ||
| + | |tss_score=1 | ||
}} | }} | ||
Revision as of 18:30, 8 March 2018
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | -34290 |
|---|---|
| Nearest PromoterID: | NR_135839 |
| Entrez ID: | 105376114 |
| Nearest Unigene: | Hs.9589 |
| Nearest Refseq: | NR_135839 |
| Nearest Ensembl: | ENSG00000254473 |
| Gene Name: | LOC105376114 |
| Gene Alias: | - |
| Gene Description: | uncharacterized LOC105376114 |
| Gene Type: | ncRNA |
| CpG%: | 0.03 |
| GC%: | 0.368159 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "-6(TTTTTAAAAGAC,+,0.00)" |
