Difference between revisions of "TSS:Hg 232200.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=CR407690:-169 KU178388:-169 KU178389:-169 CU674070:-170 KJ892377:-170 AB590763:-172 AK290643:-194 X56134:-212 Z19554:-288 BC030573:-293 BC000163:-293 AF...") |
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|distance_to_tss=391 | |distance_to_tss=391 | ||
|end=17229596 | |end=17229596 | ||
| + | |end_of_center_position=17236374 | ||
|entrez_id=100507347 | |entrez_id=100507347 | ||
|gc_percent=0.731343 | |gc_percent=0.731343 | ||
| Line 24: | Line 25: | ||
|species=human | |species=human | ||
|start=17229591 | |start=17229591 | ||
| + | |start_of_center_position=17236373 | ||
|strand=+ | |strand=+ | ||
|transcript_name=CR407690 KU178388 KU178389 | |transcript_name=CR407690 KU178388 KU178389 | ||
Revision as of 00:30, 12 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 17236373 |
|---|---|
| End of the center position in the TSS region: | 17236374 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | CR407690 KU178388 KU178389 |
|---|---|
| Distance: | -169 |
| Num_trans: | 31 |
| All_trans: | CR407690:-169 KU178388:-169 KU178389:-169 CU674070:-170 KJ892377:-170 AB590763:-172 AK290643:-194 X56134:-212 Z19554:-288 BC030573:-293 BC000163:-293 AF328728:-297 ENST00000485947.1:-301 uc057sbe.1:-301 AK222482:-312 X16478:-313 ENST00000224237.9:-314 ENST00000487938.5:-314 uc057sbc.1:-314 uc057sbd.1:-314 AK222507:-314 AK222602:-314 AK056766:-314 AK091813:-314 AK097336:-314 AK098444:-314 EU794672:-314 M25246:323 ENST00000469543.5:408 uc057sbf.1:408 AK093924:408 |
TATA-Box annotation
| Distance to TSS: | 391 |
|---|---|
| Nearest PromoterID: | NR_108061 |
| Entrez ID: | 100507347 |
| Nearest Unigene: | Hs.740502 |
| Nearest Refseq: | NR_108060 |
| Nearest Ensembl: | ENSG00000229124 |
| Gene Name: | vimentin |
| Gene Alias: | - |
| Gene Description: | VIM antisense RNA 1 |
| Gene Type: | ncRNA |
| CpG%: | 0.125 |
| GC%: | 0.731343 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
