Difference between revisions of "TSS:Hg 232223.1"
From referenceTSS
(Created page with "{{TSSDetail |chr=chr10 |cpg_percent=0.035 |distance= |distance_to_tss=33666 |end=248422 |entrez_id=102465753 |gc_percent=0.487562 |gene_alias=B-ATF|hsa-mir-7641-2 |gene_descri...") |
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| Line 5: | Line 5: | ||
|distance_to_tss=33666 | |distance_to_tss=33666 | ||
|end=248422 | |end=248422 | ||
| + | |end_of_center_position=26861082 | ||
|entrez_id=102465753 | |entrez_id=102465753 | ||
|gc_percent=0.487562 | |gc_percent=0.487562 | ||
| − | |gene_alias=B-ATF | + | |gene_alias=B-ATF |
|gene_description=microRNA 7641-2 | |gene_description=microRNA 7641-2 | ||
|gene_name=MIR7641-2 | |gene_name=MIR7641-2 | ||
|gene_type=ncRNA | |gene_type=ncRNA | ||
| + | |hsa-mir-7641-2= | ||
|nearest_ensembl=ENSG00000280494 | |nearest_ensembl=ENSG00000280494 | ||
|nearest_promoter_id=NR_106988 | |nearest_promoter_id=NR_106988 | ||
| Line 18: | Line 20: | ||
|species=human | |species=human | ||
|start=248418 | |start=248418 | ||
| + | |start_of_center_position=26861081 | ||
|strand=- | |strand=- | ||
|tata_box="81(GTTCCTAAAAGG,-,0.00)" | |tata_box="81(GTTCCTAAAAGG,-,0.00)" | ||
Revision as of 01:28, 12 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 26861081 |
|---|---|
| End of the center position in the TSS region: | 26861082 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | 33666 |
|---|---|
| Nearest PromoterID: | NR_106988 |
| Entrez ID: | 102465753 |
| Nearest Unigene: | |
| Nearest Refseq: | NR_106988 |
| Nearest Ensembl: | ENSG00000280494 |
| Gene Name: | MIR7641-2 |
| Gene Alias: | B-ATF |
| Gene Description: | microRNA 7641-2 |
| Gene Type: | ncRNA |
| CpG%: | 0.035 |
| GC%: | 0.487562 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "81(GTTCCTAAAAGG,-,0.00)" |
