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Difference between revisions of "TSS:Hg 232226.1"

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(Created page with "{{TSSDetail |all_trans=ENST00000536334.5:-3 ENST00000490841.6:-3 ENST00000376137.8:-3 ENST00000346832.9:-3 NM_001178124:-3 NM_001178123:-3 NM_001178122:-3 NM_001178121:-3 NM_0...")
 
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{{TSSDetail
 
{{TSSDetail
 +
|ABLBP4=
 +
|E3B1=
 +
|NAP1BP=
 +
|SSH3BP=
 +
|SSH3BP1=
 
|all_trans=ENST00000536334.5:-3 ENST00000490841.6:-3 ENST00000376137.8:-3 ENST00000346832.9:-3 NM_001178124:-3 NM_001178123:-3 NM_001178122:-3 NM_001178121:-3 NM_001178120:-3 NM_001178119:-3 NM_001178116:-3 NM_001178125:-3 NM_005470:-3 NM_001012750:-3 NM_001012752:-3 NM_001012751:-3 uc001itb.3:-3 uc010qdj.2:-3 uc010qdi.2:-3 uc010qdk.2:-3 ENST00000376138.7:50 uc001ita.4:50 AB040151:50 ENST00000376166.5:94 uc001ite.4:94 AK126803:94 AK298646:96 AF260262:99 ENST00000376160.5:107 uc057sjb.1:107 ENST00000376139.6:109 uc001isz.4:109 AK291823:132 BC024254:142 AB209268:142 ENST00000376142.6:145 ENST00000359188.8:145 uc001itc.4:145 uc001isx.4:145 BC013238:145 U87166:145 AF006516:151 ENST00000376170.8:188 uc001itd.4:188 AF001628:188 AK296751:195 AF540955:205 ENST00000376140.3:217 uc001isy.4:217 FJ380057:217 FJ380058:217 FJ380059:217 AB529081:217 KJ904640:218
 
|all_trans=ENST00000536334.5:-3 ENST00000490841.6:-3 ENST00000376137.8:-3 ENST00000346832.9:-3 NM_001178124:-3 NM_001178123:-3 NM_001178122:-3 NM_001178121:-3 NM_001178120:-3 NM_001178119:-3 NM_001178116:-3 NM_001178125:-3 NM_005470:-3 NM_001012750:-3 NM_001012752:-3 NM_001012751:-3 uc001itb.3:-3 uc010qdj.2:-3 uc010qdi.2:-3 uc010qdk.2:-3 ENST00000376138.7:50 uc001ita.4:50 AB040151:50 ENST00000376166.5:94 uc001ite.4:94 AK126803:94 AK298646:96 AF260262:99 ENST00000376160.5:107 uc057sjb.1:107 ENST00000376139.6:109 uc001isz.4:109 AK291823:132 BC024254:142 AB209268:142 ENST00000376142.6:145 ENST00000359188.8:145 uc001itc.4:145 uc001isx.4:145 BC013238:145 U87166:145 AF006516:151 ENST00000376170.8:188 uc001itd.4:188 AF001628:188 AK296751:195 AF540955:205 ENST00000376140.3:217 uc001isy.4:217 FJ380057:217 FJ380058:217 FJ380059:217 AB529081:217 KJ904640:218
 
|chr=chr10
 
|chr=chr10
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|distance_to_tss=5
 
|distance_to_tss=5
 
|end=26861084
 
|end=26861084
 +
|end_of_center_position=27983374
 
|entrez_id=10006
 
|entrez_id=10006
 
|gc_percent=0.59204
 
|gc_percent=0.59204
−
|gene_alias=ABI-1|ABLBP4|E3B1|NAP1BP|SSH3BP|SSH3BP1
+
|gene_alias=ABI-1
 
|gene_description=abl interactor 1
 
|gene_description=abl interactor 1
 
|gene_id=10006
 
|gene_id=10006
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|species=human
 
|species=human
 
|start=26861079
 
|start=26861079
 +
|start_of_center_position=27983373
 
|strand=-
 
|strand=-
 
|transcript_name=ENST00000536334.5 ENST00000490841.6 ENST00000376137.8 ENST00000346832.9 NM_001178124 NM_001178123 NM_001178122 NM_001178121 NM_001178120 NM_001178119 NM_001178116 NM_001178125 NM_005470 NM_001012750 NM_001012752 NM_001012751 uc001itb.3 uc010qdj.2 uc010qdi.2 uc010qdk.2
 
|transcript_name=ENST00000536334.5 ENST00000490841.6 ENST00000376137.8 ENST00000346832.9 NM_001178124 NM_001178123 NM_001178122 NM_001178121 NM_001178120 NM_001178119 NM_001178116 NM_001178125 NM_005470 NM_001012750 NM_001012752 NM_001012751 uc001itb.3 uc010qdj.2 uc010qdi.2 uc010qdk.2

Revision as of 01:34, 12 May 2019

Basic information about the TSS

TSS ID:hg_232226.1
Species:human
Chr:chr10
TSS Classification:yes
Start:26861079
End:26861084
Strand:-
TSS Score:1
Start of the center position in the TSS region:27983373
End of the center position in the TSS region:27983374



Gene and protein annotation

Transcript_name:ENST00000536334.5 ENST00000490841.6 ENST00000376137.8 ENST00000346832.9 NM_001178124 NM_001178123 NM_001178122 NM_001178121 NM_001178120 NM_001178119 NM_001178116 NM_001178125 NM_005470 NM_001012750 NM_001012752 NM_001012751 uc001itb.3 uc010qdj.2 uc010qdi.2 uc010qdk.2
Distance:-3
GeneID:10006
HGNC/MGI_ID:HGNC:11320
UniProt_ID:B6VEX3 B6VEX4 Q8IZP0
Gene_name:abl interactor 1
Gene_symbol:ABI1
Gene_synonyms:ABI-1 E3B1
Gene_source:HGNC:11320



Transcript annotation

Transcript_name:ENST00000536334.5 ENST00000490841.6 ENST00000376137.8 ENST00000346832.9 NM_001178124 NM_001178123 NM_001178122 NM_001178121 NM_001178120 NM_001178119 NM_001178116 NM_001178125 NM_005470 NM_001012750 NM_001012752 NM_001012751 uc001itb.3 uc010qdj.2 uc010qdi.2 uc010qdk.2
Distance:-3
Num_trans:54
All_trans:ENST00000536334.5:-3 ENST00000490841.6:-3 ENST00000376137.8:-3 ENST00000346832.9:-3 NM_001178124:-3 NM_001178123:-3 NM_001178122:-3 NM_001178121:-3 NM_001178120:-3 NM_001178119:-3 NM_001178116:-3 NM_001178125:-3 NM_005470:-3 NM_001012750:-3 NM_001012752:-3 NM_001012751:-3 uc001itb.3:-3 uc010qdj.2:-3 uc010qdi.2:-3 uc010qdk.2:-3 ENST00000376138.7:50 uc001ita.4:50 AB040151:50 ENST00000376166.5:94 uc001ite.4:94 AK126803:94 AK298646:96 AF260262:99 ENST00000376160.5:107 uc057sjb.1:107 ENST00000376139.6:109 uc001isz.4:109 AK291823:132 BC024254:142 AB209268:142 ENST00000376142.6:145 ENST00000359188.8:145 uc001itc.4:145 uc001isx.4:145 BC013238:145 U87166:145 AF006516:151 ENST00000376170.8:188 uc001itd.4:188 AF001628:188 AK296751:195 AF540955:205 ENST00000376140.3:217 uc001isy.4:217 FJ380057:217 FJ380058:217 FJ380059:217 AB529081:217 KJ904640:218



TATA-Box annotation

Distance to TSS:5
Nearest PromoterID:NM_001012750
Entrez ID:10006
Nearest Unigene:Hs.508148
Nearest Refseq:NM_005470
Nearest Ensembl:ENSG00000136754
Gene Name:abl interactor 1
Gene Alias:ABI-1
Gene Description:abl interactor 1
Gene Type:protein-coding
CpG%:0.07
GC%:0.59204
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):
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