Difference between revisions of "TSS:Hg 232280.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENST00000582299.2:51 NR_126580:-75 |chr=chr10 |cpg_percent=0.055 |distance=51 |distance_to_tss=75 |end=46109570 |entrez_id=653268 |gc_percent=0.636816 |...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |AGAP7= | ||
| + | |CTGLF4= | ||
|all_trans=ENST00000582299.2:51 NR_126580:-75 | |all_trans=ENST00000582299.2:51 NR_126580:-75 | ||
| + | |bA109G10.1= | ||
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.055 | |cpg_percent=0.055 | ||
| Line 6: | Line 9: | ||
|distance_to_tss=75 | |distance_to_tss=75 | ||
|end=46109570 | |end=46109570 | ||
| + | |end_of_center_position=46581764 | ||
|entrez_id=653268 | |entrez_id=653268 | ||
|gc_percent=0.636816 | |gc_percent=0.636816 | ||
| − | |gene_alias=AGAP-7 | + | |gene_alias=AGAP-7 |
|gene_description="ArfGAP with GTPase domain, ankyrin repeat and PH domain 7, pseudogene" | |gene_description="ArfGAP with GTPase domain, ankyrin repeat and PH domain 7, pseudogene" | ||
|gene_id= | |gene_id= | ||
| Line 24: | Line 28: | ||
|species=human | |species=human | ||
|start=46109569 | |start=46109569 | ||
| + | |start_of_center_position=46581763 | ||
|strand=+ | |strand=+ | ||
|transcript_name=ENST00000582299.2 | |transcript_name=ENST00000582299.2 | ||
Revision as of 03:00, 12 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 46581763 |
|---|---|
| End of the center position in the TSS region: | 46581764 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000582299.2 |
|---|---|
| Distance: | 51 |
| Num_trans: | 2 |
| All_trans: | ENST00000582299.2:51 NR_126580:-75 |
TATA-Box annotation
| Distance to TSS: | 75 |
|---|---|
| Nearest PromoterID: | NR_126580 |
| Entrez ID: | 653268 |
| Nearest Unigene: | Hs.447454 |
| Nearest Refseq: | NM_001077685 |
| Nearest Ensembl: | |
| Gene Name: | "ArfGAP with GTPase domain, ankyrin repeat and PH domain 7, pseudogene" |
| Gene Alias: | AGAP-7 |
| Gene Description: | "ArfGAP with GTPase domain, ankyrin repeat and PH domain 7, pseudogene" |
| Gene Type: | pseudo |
| CpG%: | 0.055 |
| GC%: | 0.636816 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
