Difference between revisions of "TSS:Hg 232393.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENST00000338487.5:-50 NM_001003892:-50 uc001jwq.1:-50 AY686755:-50 KJ896046:-50 BC137321:-119 BC137322:-119 |chr=chr10 |cpg_percent=0.015 |distance=-50...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |FMDSP= | ||
|all_trans=ENST00000338487.5:-50 NM_001003892:-50 uc001jwq.1:-50 AY686755:-50 KJ896046:-50 BC137321:-119 BC137322:-119 | |all_trans=ENST00000338487.5:-50 NM_001003892:-50 uc001jwq.1:-50 AY686755:-50 KJ896046:-50 BC137321:-119 BC137322:-119 | ||
|chr=chr10 | |chr=chr10 | ||
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|distance_to_tss=50 | |distance_to_tss=50 | ||
|end=75058464 | |end=75058464 | ||
| + | |end_of_center_position=7788105 | ||
|entrez_id=338599 | |entrez_id=338599 | ||
|gc_percent=0.542289 | |gc_percent=0.542289 | ||
| − | |gene_alias=DUSP27 | + | |gene_alias=DUSP27 |
|gene_description=dual specificity phosphatase and pro isomerase domain containing 1 | |gene_description=dual specificity phosphatase and pro isomerase domain containing 1 | ||
|gene_id=338599 | |gene_id=338599 | ||
| Line 24: | Line 26: | ||
|species=human | |species=human | ||
|start=75058463 | |start=75058463 | ||
| + | |start_of_center_position=7788104 | ||
|strand=- | |strand=- | ||
|tata_box="-59(GGCTCTAAAATG,-,0.00)" | |tata_box="-59(GGCTCTAAAATG,-,0.00)" | ||
Revision as of 23:30, 11 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 7788104 |
|---|---|
| End of the center position in the TSS region: | 7788105 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000338487.5 NM_001003892 uc001jwq.1 AY686755 KJ896046 |
|---|---|
| Distance: | -50 |
| Num_trans: | 7 |
| All_trans: | ENST00000338487.5:-50 NM_001003892:-50 uc001jwq.1:-50 AY686755:-50 KJ896046:-50 BC137321:-119 BC137322:-119 |
TATA-Box annotation
| Distance to TSS: | 50 |
|---|---|
| Nearest PromoterID: | NM_001003892 |
| Entrez ID: | 338599 |
| Nearest Unigene: | Hs.535090 |
| Nearest Refseq: | NM_001003892 |
| Nearest Ensembl: | ENSG00000188716 |
| Gene Name: | dual specificity phosphatase and pro isomerase domain containing 1 |
| Gene Alias: | DUSP27 |
| Gene Description: | dual specificity phosphatase and pro isomerase domain containing 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.015 |
| GC%: | 0.542289 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "-59(GGCTCTAAAATG,-,0.00)" |
