Difference between revisions of "TSS:Hg 23300.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENST00000463502.1:0 NM_004180:0 NM_133484:0 uc061oxq.1:0 U63830:0 U59863:0 ENST00000432002.5:-28 uc061oxp.1:-28 ENST00000259075.6:-47 uc002ubr.3:-47 |ch...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |ITRAF= | ||
| + | |TRAF2= | ||
|all_trans=ENST00000463502.1:0 NM_004180:0 NM_133484:0 uc061oxq.1:0 U63830:0 U59863:0 ENST00000432002.5:-28 uc061oxp.1:-28 ENST00000259075.6:-47 uc002ubr.3:-47 | |all_trans=ENST00000463502.1:0 NM_004180:0 NM_133484:0 uc061oxq.1:0 U63830:0 U59863:0 ENST00000432002.5:-28 uc061oxp.1:-28 ENST00000259075.6:-47 uc002ubr.3:-47 | ||
|chr=chr2 | |chr=chr2 | ||
| Line 6: | Line 8: | ||
|distance_to_tss=7 | |distance_to_tss=7 | ||
|end=161136970 | |end=161136970 | ||
| + | |end_of_center_position=161136963 | ||
|entrez_id=10010 | |entrez_id=10010 | ||
|gc_percent=0.422886 | |gc_percent=0.422886 | ||
| − | |gene_alias=I-TRAF | + | |gene_alias=I-TRAF |
|gene_description=TRAF family member associated NFKB activator | |gene_description=TRAF family member associated NFKB activator | ||
|gene_id=10010 | |gene_id=10010 | ||
| Line 24: | Line 27: | ||
|species=human | |species=human | ||
|start=161136954 | |start=161136954 | ||
| + | |start_of_center_position=161136962 | ||
|strand=+ | |strand=+ | ||
|transcript_name=ENST00000463502.1 NM_004180 NM_133484 uc061oxq.1 U63830 U59863 | |transcript_name=ENST00000463502.1 NM_004180 NM_133484 uc061oxq.1 U63830 U59863 | ||
Revision as of 20:40, 11 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 161136962 |
|---|---|
| End of the center position in the TSS region: | 161136963 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000463502.1 NM_004180 NM_133484 uc061oxq.1 U63830 U59863 |
|---|---|
| Distance: | 0 |
| Num_trans: | 10 |
| All_trans: | ENST00000463502.1:0 NM_004180:0 NM_133484:0 uc061oxq.1:0 U63830:0 U59863:0 ENST00000432002.5:-28 uc061oxp.1:-28 ENST00000259075.6:-47 uc002ubr.3:-47 |
TATA-Box annotation
| Distance to TSS: | 7 |
|---|---|
| Nearest PromoterID: | NM_004180 |
| Entrez ID: | 10010 |
| Nearest Unigene: | Hs.132257 |
| Nearest Refseq: | NM_004180 |
| Nearest Ensembl: | ENSG00000136560 |
| Gene Name: | TRAF family member associated NFKB activator |
| Gene Alias: | I-TRAF |
| Gene Description: | TRAF family member associated NFKB activator |
| Gene Type: | protein-coding |
| CpG%: | 0 |
| GC%: | 0.422886 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
