Difference between revisions of "TSS:Hg 101153.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.075 |distance_to_tss=22 |entrez_id=29979 |gc_percent=0.557214 |gene_alias=DA41|DSK2|PLIC-1|UBQN|XDRP1 |gene_description=ubiquilin 1 |gene_name=UBQLN...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |DSK2= | ||
| + | |PLIC-1= | ||
| + | |UBQN= | ||
| + | |XDRP1= | ||
| + | |all_trans=NM_013438:-4 NM_053067:-4 ENST00000376395.8:11 uc004amv.4:11 AK074535:11 AL136643:257 AK027556:262 BC039294:270 BC017289:270 AK027576:271 ENST00000257468.11:280 uc004amw.4:280 BC010066:281 AB035275:426 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.075 | |cpg_percent=0.075 | ||
| + | |distance=-4 | ||
|distance_to_tss=22 | |distance_to_tss=22 | ||
| + | |end=83708249 | ||
|entrez_id=29979 | |entrez_id=29979 | ||
|gc_percent=0.557214 | |gc_percent=0.557214 | ||
|gene_alias=DA41|DSK2|PLIC-1|UBQN|XDRP1 | |gene_alias=DA41|DSK2|PLIC-1|UBQN|XDRP1 | ||
|gene_description=ubiquilin 1 | |gene_description=ubiquilin 1 | ||
| − | |gene_name=UBQLN1 | + | |gene_id=29979 |
| + | |gene_name=ubiquilin 1 | ||
| + | |gene_source=HGNC:12508 | ||
| + | |gene_symbol=UBQLN1 | ||
| + | |gene_synonyms=DA41 DSK2 PLIC-1 XDRP1 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:12508 | ||
|nearest_ensembl=ENSG00000135018 | |nearest_ensembl=ENSG00000135018 | ||
|nearest_promoter_id=NM_013438 | |nearest_promoter_id=NM_013438 | ||
|nearest_refseq=NM_013438 | |nearest_refseq=NM_013438 | ||
|nearest_unigene=Hs.9589 | |nearest_unigene=Hs.9589 | ||
| + | |num_trans=14 | ||
| + | |species=human | ||
| + | |start=83708213 | ||
| + | |strand=- | ||
| + | |transcript_name=NM_013438 NM_053067 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_101153.1 | |tss_id=hg_101153.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=Q9UMX0 | ||
}} | }} | ||
Revision as of 18:31, 8 March 2018
Basic information about the TSS
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|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | NM_013438 NM_053067 |
|---|---|
| Distance: | -4 |
| Num_trans: | 14 |
| All_trans: | NM_013438:-4 NM_053067:-4 ENST00000376395.8:11 uc004amv.4:11 AK074535:11 AL136643:257 AK027556:262 BC039294:270 BC017289:270 AK027576:271 ENST00000257468.11:280 uc004amw.4:280 BC010066:281 AB035275:426 |
TATA-Box annotation
| Distance to TSS: | 22 |
|---|---|
| Nearest PromoterID: | NM_013438 |
| Entrez ID: | 29979 |
| Nearest Unigene: | Hs.9589 |
| Nearest Refseq: | NM_013438 |
| Nearest Ensembl: | ENSG00000135018 |
| Gene Name: | ubiquilin 1 |
| Gene Alias: | DA41 |
| Gene Description: | ubiquilin 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.075 |
| GC%: | 0.557214 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
