Difference between revisions of "TSS:Hg 101156.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.145 |distance_to_tss=22 |entrez_id=80318 |gc_percent=0.781095 |gene_alias=FKSG21|GKAP42 |gene_description=G kinase anchoring protein 1 |gene_name=GK...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |GKAP42= | ||
| + | |all_trans=NM_001135953:0 NM_025211:0 ENST00000376371.6:46 uc004amy.4:46 BC014476:46 ENST00000376365.7:156 uc004amz.4:156 AB033131:156 AB033132:156 ENST00000462223.1:-279 uc064tzk.1:-279 ENST00000485742.5:492 uc064tzj.1:492 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.145 | |cpg_percent=0.145 | ||
| + | |distance=0 | ||
|distance_to_tss=22 | |distance_to_tss=22 | ||
| + | |end=83817842 | ||
|entrez_id=80318 | |entrez_id=80318 | ||
|gc_percent=0.781095 | |gc_percent=0.781095 | ||
|gene_alias=FKSG21|GKAP42 | |gene_alias=FKSG21|GKAP42 | ||
|gene_description=G kinase anchoring protein 1 | |gene_description=G kinase anchoring protein 1 | ||
| − | |gene_name=GKAP1 | + | |gene_id=80318 |
| + | |gene_name=G kinase anchoring protein 1 | ||
| + | |gene_source=HGNC:17496 | ||
| + | |gene_symbol=GKAP1 | ||
| + | |gene_synonyms=FKSG21 GKAP42 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:17496 | ||
|nearest_ensembl=ENSG00000165113 | |nearest_ensembl=ENSG00000165113 | ||
|nearest_promoter_id=NM_025211 | |nearest_promoter_id=NM_025211 | ||
|nearest_refseq=NM_025211 | |nearest_refseq=NM_025211 | ||
|nearest_unigene=Hs.522255 | |nearest_unigene=Hs.522255 | ||
| + | |num_trans=13 | ||
| + | |species=human | ||
| + | |start=83817787 | ||
| + | |strand=- | ||
| + | |transcript_name=NM_001135953 NM_025211 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_101156.1 | |tss_id=hg_101156.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=Q5VSY0 | ||
}} | }} | ||
Revision as of 18:31, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | NM_001135953 NM_025211 |
|---|---|
| Distance: | 0 |
| Num_trans: | 13 |
| All_trans: | NM_001135953:0 NM_025211:0 ENST00000376371.6:46 uc004amy.4:46 BC014476:46 ENST00000376365.7:156 uc004amz.4:156 AB033131:156 AB033132:156 ENST00000462223.1:-279 uc064tzk.1:-279 ENST00000485742.5:492 uc064tzj.1:492 |
TATA-Box annotation
| Distance to TSS: | 22 |
|---|---|
| Nearest PromoterID: | NM_025211 |
| Entrez ID: | 80318 |
| Nearest Unigene: | Hs.522255 |
| Nearest Refseq: | NM_025211 |
| Nearest Ensembl: | ENSG00000165113 |
| Gene Name: | G kinase anchoring protein 1 |
| Gene Alias: | FKSG21 |
| Gene Description: | G kinase anchoring protein 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.145 |
| GC%: | 0.781095 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
