Difference between revisions of "TSS:Hg 101168.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.02 |distance_to_tss=1836 |entrez_id=3190 |gc_percent=0.363184 |gene_alias=AUKS|CSBP|HNRPK|TUNP |gene_description=heterogeneous nuclear ribonucleopro...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |CSBP= | ||
| + | |HNRPK= | ||
| + | |TUNP= | ||
| + | |all_trans=ENST00000351839.7:0 uc064uag.1:0 S74678:0 AY911506:11 KJ896997:167 AB451263:167 CR456771:167 DQ890727:167 KJ891374:167 DQ893902:167 AB384978:167 AB451390:167 CU674174:167 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.02 | |cpg_percent=0.02 | ||
| + | |distance=0 | ||
|distance_to_tss=1836 | |distance_to_tss=1836 | ||
| + | |end=83978452 | ||
|entrez_id=3190 | |entrez_id=3190 | ||
|gc_percent=0.363184 | |gc_percent=0.363184 | ||
|gene_alias=AUKS|CSBP|HNRPK|TUNP | |gene_alias=AUKS|CSBP|HNRPK|TUNP | ||
|gene_description=heterogeneous nuclear ribonucleoprotein K | |gene_description=heterogeneous nuclear ribonucleoprotein K | ||
| − | |gene_name=HNRNPK | + | |gene_id=3190 |
| + | |gene_name=heterogeneous nuclear ribonucleoprotein K | ||
| + | |gene_source=HGNC:5044 | ||
| + | |gene_symbol=HNRNPK | ||
| + | |gene_synonyms=CSBP TUNP | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:5044 | ||
|nearest_ensembl=ENSG00000165119 | |nearest_ensembl=ENSG00000165119 | ||
|nearest_promoter_id=NM_001318186 | |nearest_promoter_id=NM_001318186 | ||
|nearest_refseq=NM_002140 | |nearest_refseq=NM_002140 | ||
|nearest_unigene=Hs.522257 | |nearest_unigene=Hs.522257 | ||
| + | |num_trans=13 | ||
| + | |species=human | ||
| + | |start=83978418 | ||
| + | |strand=- | ||
|tata_box="-27(GTTCTTATAGGC,+,0.00)" | |tata_box="-27(GTTCTTATAGGC,+,0.00)" | ||
| + | |transcript_name=ENST00000351839.7 uc064uag.1 S74678 | ||
| + | |tss_classification=no | ||
|tss_id=hg_101168.1 | |tss_id=hg_101168.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=P61978 | ||
}} | }} | ||
Revision as of 18:31, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000351839.7 uc064uag.1 S74678 |
|---|---|
| Distance: | 0 |
| Num_trans: | 13 |
| All_trans: | ENST00000351839.7:0 uc064uag.1:0 S74678:0 AY911506:11 KJ896997:167 AB451263:167 CR456771:167 DQ890727:167 KJ891374:167 DQ893902:167 AB384978:167 AB451390:167 CU674174:167 |
TATA-Box annotation
| Distance to TSS: | 1836 |
|---|---|
| Nearest PromoterID: | NM_001318186 |
| Entrez ID: | 3190 |
| Nearest Unigene: | Hs.522257 |
| Nearest Refseq: | NM_002140 |
| Nearest Ensembl: | ENSG00000165119 |
| Gene Name: | heterogeneous nuclear ribonucleoprotein K |
| Gene Alias: | AUKS |
| Gene Description: | heterogeneous nuclear ribonucleoprotein K |
| Gene Type: | protein-coding |
| CpG%: | 0.02 |
| GC%: | 0.363184 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "-27(GTTCTTATAGGC,+,0.00)" |
