Difference between revisions of "TSS:Hg 101180.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.005 |distance_to_tss=-249 |entrez_id=64078 |gc_percent=0.58209 |gene_alias=CNT3 |gene_description=solute carrier family 28 member 3 |gene_name=SLC28...") |
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| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=NM_022127:245 AF305210:245 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.005 | |cpg_percent=0.005 | ||
| + | |distance=245 | ||
|distance_to_tss=-249 | |distance_to_tss=-249 | ||
| + | |end=84368751 | ||
|entrez_id=64078 | |entrez_id=64078 | ||
|gc_percent=0.58209 | |gc_percent=0.58209 | ||
|gene_alias=CNT3 | |gene_alias=CNT3 | ||
|gene_description=solute carrier family 28 member 3 | |gene_description=solute carrier family 28 member 3 | ||
| − | |gene_name=SLC28A3 | + | |gene_id=64078 |
| + | |gene_name=solute carrier family 28 member 3 | ||
| + | |gene_source=HGNC:16484 | ||
| + | |gene_symbol=SLC28A3 | ||
| + | |gene_synonyms=CNT3 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:16484 | ||
|nearest_ensembl=ENSG00000197506 | |nearest_ensembl=ENSG00000197506 | ||
|nearest_promoter_id=NM_022127 | |nearest_promoter_id=NM_022127 | ||
|nearest_refseq=NM_022127 | |nearest_refseq=NM_022127 | ||
|nearest_unigene=Hs.535966 | |nearest_unigene=Hs.535966 | ||
| + | |num_trans=2 | ||
| + | |species=human | ||
| + | |start=84368742 | ||
| + | |strand=- | ||
| + | |transcript_name=NM_022127 AF305210 | ||
| + | |tss_classification=no | ||
|tss_id=hg_101180.1 | |tss_id=hg_101180.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=Q9HAS3 | ||
}} | }} | ||
Revision as of 18:32, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | NM_022127 AF305210 |
|---|---|
| Distance: | 245 |
| Num_trans: | 2 |
| All_trans: | NM_022127:245 AF305210:245 |
TATA-Box annotation
| Distance to TSS: | -249 |
|---|---|
| Nearest PromoterID: | NM_022127 |
| Entrez ID: | 64078 |
| Nearest Unigene: | Hs.535966 |
| Nearest Refseq: | NM_022127 |
| Nearest Ensembl: | ENSG00000197506 |
| Gene Name: | solute carrier family 28 member 3 |
| Gene Alias: | CNT3 |
| Gene Description: | solute carrier family 28 member 3 |
| Gene Type: | protein-coding |
| CpG%: | 0.005 |
| GC%: | 0.58209 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
