Difference between revisions of "TSS:Hg 236722.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=EF608068:-93 ENST00000493253.5:-180 uc060fce.1:-180 BX647923:-180 CU687210:-188 ENST00000577817.3:-348 uc060fcg.1:-348 AB528302:-395 DQ891101:-398 DQ894...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |CK-17= | ||
| + | |K17= | ||
| + | |PC= | ||
| + | |PC2= | ||
| + | |PCHC1= | ||
|all_trans=EF608068:-93 ENST00000493253.5:-180 uc060fce.1:-180 BX647923:-180 CU687210:-188 ENST00000577817.3:-348 uc060fcg.1:-348 AB528302:-395 DQ891101:-398 DQ894283:-398 ENST00000540235.5:-425 uc060fcd.1:-425 BC072018:-425 BC072019:-439 BC011901:-441 X62571:-441 BC000159:-443 BC056421:-443 ENST00000491673.1:-459 uc060fci.1:-459 AK304373:-459 ENST00000311208.12:-461 uc002hxh.3:-461 AK095342:-461 | |all_trans=EF608068:-93 ENST00000493253.5:-180 uc060fce.1:-180 BX647923:-180 CU687210:-188 ENST00000577817.3:-348 uc060fcg.1:-348 AB528302:-395 DQ891101:-398 DQ894283:-398 ENST00000540235.5:-425 uc060fcd.1:-425 BC072018:-425 BC072019:-439 BC011901:-441 X62571:-441 BC000159:-443 BC056421:-443 ENST00000491673.1:-459 uc060fci.1:-459 AK304373:-459 ENST00000311208.12:-461 uc002hxh.3:-461 AK095342:-461 | ||
|chr=chr17 | |chr=chr17 | ||
| Line 6: | Line 11: | ||
|distance_to_tss=523 | |distance_to_tss=523 | ||
|end=41624116 | |end=41624116 | ||
| + | |end_of_center_position=49972860 | ||
|entrez_id=3872 | |entrez_id=3872 | ||
|gc_percent=0.636816 | |gc_percent=0.636816 | ||
| − | |gene_alias=39.1 | + | |gene_alias=39.1 |
|gene_description=keratin 17 | |gene_description=keratin 17 | ||
|gene_id=3872 | |gene_id=3872 | ||
| Line 24: | Line 30: | ||
|species=human | |species=human | ||
|start=41624098 | |start=41624098 | ||
| + | |start_of_center_position=49972859 | ||
|strand=- | |strand=- | ||
|transcript_name=EF608068 | |transcript_name=EF608068 | ||
Revision as of 04:28, 15 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 49972859 |
|---|---|
| End of the center position in the TSS region: | 49972860 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | EF608068 |
|---|---|
| Distance: | -93 |
| Num_trans: | 24 |
| All_trans: | EF608068:-93 ENST00000493253.5:-180 uc060fce.1:-180 BX647923:-180 CU687210:-188 ENST00000577817.3:-348 uc060fcg.1:-348 AB528302:-395 DQ891101:-398 DQ894283:-398 ENST00000540235.5:-425 uc060fcd.1:-425 BC072018:-425 BC072019:-439 BC011901:-441 X62571:-441 BC000159:-443 BC056421:-443 ENST00000491673.1:-459 uc060fci.1:-459 AK304373:-459 ENST00000311208.12:-461 uc002hxh.3:-461 AK095342:-461 |
TATA-Box annotation
| Distance to TSS: | 523 |
|---|---|
| Nearest PromoterID: | NM_000422 |
| Entrez ID: | 3872 |
| Nearest Unigene: | Hs.2785 |
| Nearest Refseq: | NM_000422 |
| Nearest Ensembl: | ENSG00000128422 |
| Gene Name: | keratin 17 |
| Gene Alias: | 39.1 |
| Gene Description: | keratin 17 |
| Gene Type: | protein-coding |
| CpG%: | 0.03 |
| GC%: | 0.636816 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
