Difference between revisions of "TSS:Hg 236952.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=NM_000727:61 ENST00000226021.4:115 uc002jfu.4:115 L07738:115 AK313852:124 BC113492:126 BC113486:126 BC069493:138 HQ258641:182 KJ890809:182 KJ896532:182...") |
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|distance_to_tss=-61 | |distance_to_tss=-61 | ||
|end=67044475 | |end=67044475 | ||
| + | |end_of_center_position=81330527 | ||
|entrez_id=786 | |entrez_id=786 | ||
|gc_percent=0.636816 | |gc_percent=0.636816 | ||
| Line 24: | Line 25: | ||
|species=human | |species=human | ||
|start=67044474 | |start=67044474 | ||
| + | |start_of_center_position=81330526 | ||
|strand=+ | |strand=+ | ||
|tata_box="-43(GCATTAATAGCA,+,0.00)" | |tata_box="-43(GCATTAATAGCA,+,0.00)" | ||
Revision as of 08:07, 15 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 81330526 |
|---|---|
| End of the center position in the TSS region: | 81330527 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | NM_000727 |
|---|---|
| Distance: | 61 |
| Num_trans: | 11 |
| All_trans: | NM_000727:61 ENST00000226021.4:115 uc002jfu.4:115 L07738:115 AK313852:124 BC113492:126 BC113486:126 BC069493:138 HQ258641:182 KJ890809:182 KJ896532:182 |
TATA-Box annotation
| Distance to TSS: | -61 |
|---|---|
| Nearest PromoterID: | NM_000727 |
| Entrez ID: | 786 |
| Nearest Unigene: | Hs.147989 |
| Nearest Refseq: | NM_000727 |
| Nearest Ensembl: | ENSG00000108878 |
| Gene Name: | calcium voltage-gated channel auxiliary subunit gamma 1 |
| Gene Alias: | CACNLG |
| Gene Description: | calcium voltage-gated channel auxiliary subunit gamma 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.05 |
| GC%: | 0.636816 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "-43(GCATTAATAGCA,+,0.00)" |
