Difference between revisions of "TSS:Hg 237195.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=NM_001282527:-10 NM_001198547:-10 ENST00000587971.5:137 uc060ojf.1:137 ENST00000586314.5:142 uc060oiz.1:142 AK091463:144 AK312562:160 ENST00000586309.1:...") |
|||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| + | |HRIHFB2255= | ||
| + | |NOLP= | ||
|all_trans=NM_001282527:-10 NM_001198547:-10 ENST00000587971.5:137 uc060ojf.1:137 ENST00000586314.5:142 uc060oiz.1:142 AK091463:144 AK312562:160 ENST00000586309.1:171 uc060ojh.1:171 ENST00000591917.5:350 uc060oje.1:350 ENST00000538587.5:368 uc010xbt.3:368 AK299850:368 | |all_trans=NM_001282527:-10 NM_001198547:-10 ENST00000587971.5:137 uc060ojf.1:137 ENST00000586314.5:142 uc060oiz.1:142 AK091463:144 AK312562:160 ENST00000586309.1:171 uc060ojh.1:171 ENST00000591917.5:350 uc060oje.1:350 ENST00000538587.5:368 uc010xbt.3:368 AK299850:368 | ||
|chr=chr18 | |chr=chr18 | ||
| Line 6: | Line 8: | ||
|distance_to_tss=10 | |distance_to_tss=10 | ||
|end=34222460 | |end=34222460 | ||
| + | |end_of_center_position=8817718 | ||
|entrez_id=8715 | |entrez_id=8715 | ||
|gc_percent=0.542289 | |gc_percent=0.542289 | ||
| − | |gene_alias=CT125 | + | |gene_alias=CT125 |
|gene_description=nucleolar protein 4 | |gene_description=nucleolar protein 4 | ||
|gene_id=8715 | |gene_id=8715 | ||
| Line 24: | Line 27: | ||
|species=human | |species=human | ||
|start=34222459 | |start=34222459 | ||
| + | |start_of_center_position=8817717 | ||
|strand=- | |strand=- | ||
|transcript_name=NM_001282527 NM_001198547 | |transcript_name=NM_001282527 NM_001198547 | ||
Revision as of 16:53, 10 May 2019
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 8817717 |
|---|---|
| End of the center position in the TSS region: | 8817718 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | NM_001282527 NM_001198547 |
|---|---|
| Distance: | -10 |
| Num_trans: | 15 |
| All_trans: | NM_001282527:-10 NM_001198547:-10 ENST00000587971.5:137 uc060ojf.1:137 ENST00000586314.5:142 uc060oiz.1:142 AK091463:144 AK312562:160 ENST00000586309.1:171 uc060ojh.1:171 ENST00000591917.5:350 uc060oje.1:350 ENST00000538587.5:368 uc010xbt.3:368 AK299850:368 |
TATA-Box annotation
| Distance to TSS: | 10 |
|---|---|
| Nearest PromoterID: | NM_001198547 |
| Entrez ID: | 8715 |
| Nearest Unigene: | Hs.514795 |
| Nearest Refseq: | NM_003787 |
| Nearest Ensembl: | ENSG00000101746 |
| Gene Name: | nucleolar protein 4 |
| Gene Alias: | CT125 |
| Gene Description: | nucleolar protein 4 |
| Gene Type: | protein-coding |
| CpG%: | 0.065 |
| GC%: | 0.542289 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
