Personal tools

Difference between revisions of "TSS:Hg 237876.1"

From referenceTSS

Jump to: navigation, search
(Created page with "{{TSSDetail |all_trans=ENST00000360844.6:17 uc002pxf.5:17 AK298284:17 ENST00000599649.5:18 uc061bye.1:18 AY854038:18 NM_001098612:-56 AY358369:63 ENST00000429354.3:-66 uc061by...")
 
Line 6: Line 6:
 
|distance_to_tss=59
 
|distance_to_tss=59
 
|end=51646823
 
|end=51646823
 +
|end_of_center_position=99264418
 
|entrez_id=100049587
 
|entrez_id=100049587
 
|gc_percent=0.651741
 
|gc_percent=0.651741
Line 24: Line 25:
 
|species=human
 
|species=human
 
|start=51646817
 
|start=51646817
 +
|start_of_center_position=99264417
 
|strand=-
 
|strand=-
 
|transcript_name=ENST00000360844.6 uc002pxf.5 AK298284
 
|transcript_name=ENST00000360844.6 uc002pxf.5 AK298284

Revision as of 04:43, 11 May 2019

Basic information about the TSS


TSS ID:hg_237876.1
Species:human
Chr:chr19
TSS Classification:yes
Start:51646817
End:51646823
Strand:-
TSS Score:1
Start of the center position in the TSS region:99264417
End of the center position in the TSS region:99264418



Gene and protein annotation


Transcript_name:ENST00000360844.6 uc002pxf.5 AK298284
Distance:17
GeneID:100049587
HGNC/MGI_ID:HGNC:32926
UniProt_ID:Q08ET2
Gene_name:sialic acid binding Ig like lectin 14
Gene_symbol:SIGLEC14
Gene_synonyms:
Gene_source:HGNC:32926



Transcript annotation


Transcript_name:ENST00000360844.6 uc002pxf.5 AK298284
Distance:17
Num_trans:10
All_trans:ENST00000360844.6:17 uc002pxf.5:17 AK298284:17 ENST00000599649.5:18 uc061bye.1:18 AY854038:18 NM_001098612:-56 AY358369:63 ENST00000429354.3:-66 uc061byf.1:-66



TATA-Box annotation


Distance to TSS:59
Nearest PromoterID:NM_001098612
Entrez ID:100049587
Nearest Unigene:Hs.707374
Nearest Refseq:NM_001098612
Nearest Ensembl:ENSG00000254415
Gene Name:sialic acid binding Ig like lectin 14
Gene Alias:-
Gene Description:sialic acid binding Ig like lectin 14
Gene Type:protein-coding
CpG%:0.035
GC%:0.651741
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):