Difference between revisions of "TSS:Hg 101217.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.075 |distance_to_tss=133 |entrez_id=79670 |gc_percent=0.666667 |gene_alias=PAPD6|TUT7 |gene_description=zinc finger CCHC-type containing 6 |gene_nam...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |TUT7= | ||
| + | |all_trans=AK308352:-20 BC032456:-72 ENST00000277141.10:-88 uc064ubw.1:-88 AL832193:-88 CR936608:-88 ENST00000375963.7:-90 uc004aoq.4:-90 AK055546:-90 CR933644:-92 ENST00000375960.6:-132 uc004aot.4:-132 AL832026:-132 CR933643:-141 BX641077:-141 BC111003:-152 NM_024617:-165 NM_001185074:-165 NM_001185059:-165 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.075 | |cpg_percent=0.075 | ||
| + | |distance=-20 | ||
|distance_to_tss=133 | |distance_to_tss=133 | ||
| + | |end=86354322 | ||
|entrez_id=79670 | |entrez_id=79670 | ||
|gc_percent=0.666667 | |gc_percent=0.666667 | ||
|gene_alias=PAPD6|TUT7 | |gene_alias=PAPD6|TUT7 | ||
|gene_description=zinc finger CCHC-type containing 6 | |gene_description=zinc finger CCHC-type containing 6 | ||
| − | |gene_name=ZCCHC6 | + | |gene_id=79670 |
| + | |gene_name=zinc finger CCHC-type containing 6 | ||
| + | |gene_source=HGNC:25817 | ||
| + | |gene_symbol=ZCCHC6 | ||
| + | |gene_synonyms=FLJ13409 KIAA1711 PAPD6 TUT7 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:25817 | ||
|nearest_ensembl=ENSG00000083223 | |nearest_ensembl=ENSG00000083223 | ||
|nearest_promoter_id=NM_001330718 | |nearest_promoter_id=NM_001330718 | ||
|nearest_refseq=NM_024617 | |nearest_refseq=NM_024617 | ||
|nearest_unigene=Hs.597057 | |nearest_unigene=Hs.597057 | ||
| + | |num_trans=19 | ||
| + | |species=human | ||
| + | |start=86354311 | ||
| + | |strand=- | ||
| + | |transcript_name=AK308352 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_101217.1 | |tss_id=hg_101217.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Revision as of 18:33, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | AK308352 |
|---|---|
| Distance: | -20 |
| Num_trans: | 19 |
| All_trans: | AK308352:-20 BC032456:-72 ENST00000277141.10:-88 uc064ubw.1:-88 AL832193:-88 CR936608:-88 ENST00000375963.7:-90 uc004aoq.4:-90 AK055546:-90 CR933644:-92 ENST00000375960.6:-132 uc004aot.4:-132 AL832026:-132 CR933643:-141 BX641077:-141 BC111003:-152 NM_024617:-165 NM_001185074:-165 NM_001185059:-165 |
TATA-Box annotation
| Distance to TSS: | 133 |
|---|---|
| Nearest PromoterID: | NM_001330718 |
| Entrez ID: | 79670 |
| Nearest Unigene: | Hs.597057 |
| Nearest Refseq: | NM_024617 |
| Nearest Ensembl: | ENSG00000083223 |
| Gene Name: | zinc finger CCHC-type containing 6 |
| Gene Alias: | PAPD6 |
| Gene Description: | zinc finger CCHC-type containing 6 |
| Gene Type: | protein-coding |
| CpG%: | 0.075 |
| GC%: | 0.666667 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
